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Job DescriptionQ24145
Confidence100.00%DateTue Jan 22 11:35:34 GMT 2013
Rank292Aligned Residues247
% Identity23%Templatec3utoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:twitchin; PDBTitle: twitchin kinase region from c.elegans (fn31-nl-kin-crd-ig26)
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   660.........670.........680.........690.........700... ......710.........720.........730...... .
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Query Sequence  EKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDE. HSNKQEFLREASVMMRLEHKCIVRLIGIAKGEM. L
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Template Sequence  DHYDIHEELGTGAFGVVHRVT. . . . . . . ERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM
Template Known Secondary structure  GTTT.......TTT



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   154.....160.........170.... .....180.........190.........200.........210.........220......
 
   738.740.........750.........760.........770.........780.........790.........800 .........810.....
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Query Sequence  MMVQELAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNILLTAR. . HQAKISDFGMSRSLR
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Template Sequence  VMIYEFMSGGELFEKVADEHNK. MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD
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   227..230.........240........ .250.........260.........270.........280.........290.........300.....
 
   816...820.........830.........840.........850.........860.........870.........880.... .....890..
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Query Sequence  PGSTEYQFTQGGRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGE. . . RLPQPNLC
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Template Sequence  PKQSVKVT. . . . TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS. GLSPFGGENDDETLRNVKSCDWNMDDSAFSGI
Template Known Secondary structure  TTS....
SSGGG

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   306...310... ......320.........330.........340........ .350.........360.........370.........380
 
   893......900.........910.........
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Query Sequence  PAYIYAVMQSCWKERPKDRPTFVYLTE
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Template Sequence  SEDGKDFIRKLLLADPNTRMTIHQALE
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   381........390.........400.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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