 |
| Job Description | Q24145 | | Confidence | 96.33% | Date | Tue Jan 22 11:35:34 GMT 2013 |
| Rank | 495 | Aligned Residues | 89 |
| % Identity | 29% | Template | c3qwyA_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:cell death abnormality protein 2; |
PDBTitle: ced-2
|
| Resolution | 2.52 Å |
|
 |
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
. | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | D | S | D | P | M | K | W | Y | H | G | N | L | S | R | E | A | A | D | E | L | L | K | Q | . |
G | Y | E | D | G | T | F | L | V | R | E | S | S | T | A | A | G | D | F | V | L | S | L | L | C | Q | G | . |
. |
. |
E | V | C | H | Y | Q | V | R | R | . |
H | G | G | E | D | A | F | F | S | I | D | D | K | V | Q |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   | . |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|   |
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|   | . |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
D | P | F | E | W | R | S | F | Y | F | P | G | M | S | R | E | E | A | H | K | L | L | G | E | P | Q | V | S | I | G | T | F | L | M | R | D | S | S | R | . |
P | G | E | Y | S | L | T | V | R | E | A | D | E | G | N | A | V | C | H | Y | L | I | E | R | G | E | P | K | E | D | G | T | A | A | A | G | V | K | I | A |
| Template Known Secondary structure |   |
| G | G | G | G | G | G | G |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  | S | T | T |
|
| T | T |  |  |  |  |  |  |
| S | S | . | T | T |
|  |  |  |  |  |  |
|
| S | S | S | S |
|  |  |  |  |  |  |  |  |
|
|
|
| T | T | T | T |
|
|
|
|  |  |  | T |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
|   |
|   |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
T | K | I | L | H | G | L | D | T | L | V | D | Y | Y | Q |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|   |
|
|   |   |
|
|   |   |
|   |
| Template Sequence |   |
N | Q | S | F | P | D | I | P | A | L | L | N | H | F | K |
| Template Known Secondary structure |   |
T |  |  |  | S | S |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|