Job Description Q24145 Confidence 100.00% Date Tue Jan 22 11:35:34 GMT 2013 Rank 93 Aligned Residues 259 % Identity 36% Template c3lxnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:non-receptor tyrosine-protein kinase tyk2; PDBTitle: structural and thermodynamic characterization of the tyk2 and jak32 kinase domains in complex with cp-690550 and cmp-6 Resolution 2.50 Å

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		653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.			.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		L	R	F	F	I	E	P	E	K	L	V	L	D	R	E	I	G	H	G	E	F	G	S	V	H	S	G	W	L	L	R	K	S	G	A	G	E	E	S	R	L	E	V	A	I	K	M	L	S	D	E	.	.	H	S	N	K	Q	E	F	L	R	E	A	S	V	M	M	R	L	E	H	K	C	I	V	R	L	I	G
Query Conservation																																																					.	.
Alig confidence																																			.	.	.																.	.
Template Conservation																																			.	.	.
Template Sequence		D	P	T	V	F	H	K	R	Y	L	K	K	I	R	D	L	G	E	G	H	F	G	K	V	S	L	Y	C	Y	D	P	T	N	.	.	.	D	G	T	G	E	M	V	A	V	K	A	L	K	A	D	A	G	P	Q	H	R	S	G	W	K	Q	E	I	D	I	L	R	T	L	Y	H	E	H	I	I	K	Y	K	G
Template Known Secondary structure								G	G	G											S	S										T	T	S	.	.	.	S	S												S	S																						T	T	B
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		888	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920				.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.
		731	.	.	.	.	.				.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		I	A	K	G	E	M	.	.	.	L	M	M	V	Q	E	L	A	P	L	G	S	M	L	Q	Y	I	L	D	H	G	H	E	I	T	A	N	A	E	L	K	V	W	A	S	Q	I	A	C	G	M	H	Y	L	E	S	Q	H	F	V	H	R	D	L	A	A	R	N	I	L	L	T	A	R	H	Q	A	K	I	S	D
Query Conservation								.	.	.
Alig confidence								.	.	.																						.	.	.
Template Conservation																																.	.	.
Template Sequence		C	C	E	D	A	G	A	A	S	L	Q	L	V	M	E	Y	V	P	L	G	S	L	R	D	Y	L	P	R	H	S	.	.	.	I	G	L	A	Q	L	L	L	F	A	Q	Q	I	C	E	G	M	A	Y	L	H	A	Q	H	Y	I	H	R	D	L	A	A	R	N	V	L	L	D	N	D	R	L	V	K	I	G	D
Template Known Secondary structure						T	T	T	T										T	T		B					G	G	G	S		.	.	.																							T	T				S			S	G	G	G						T	T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		965	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.				.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.
		808	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.																870	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	M	S	R	S	L	R	P	G	S	T	E	Y	Q	F	T	Q	G	G	R	W	P	I	R	W	Y	A	P	E	S	F	N	L	G	I	F	S	H	A	S	D	V	W	S	F	G	V	T	I	W	E	M	F	S	L	G	A	P	P	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	S
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																																										.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.																																										.
Template Sequence		F	G	L	A	K	A	V	P	E	G	.	.	.	.	H	E	Y	R	V	G	D	S	P	V	F	W	Y	A	P	E	C	L	K	E	Y	K	F	Y	Y	A	S	D	V	W	S	F	G	V	T	L	Y	E	L	L	T	.	H	C	D	S	S	Q	S	P	P	T	K	F	L	E	L	I	G	I	A	Q	G	Q	M	T
Template Known Secondary structure			T	T						T	T	.	.	.	.				B						G	G	G								S		B																			T	.	T	T		G	G	G	S											S	T	T	G	G	G
Template Predicted Secondary structure												.	.	.	.																																										.
Template SS confidence
		1042	.	.	.	.	.	.	.	1050	.					.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.		.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.
		873	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	D	A	I	K	L	V	D	S	G	E	R	L	P	Q	P	N	L	C	P	A	Y	I	Y	A	V	M	Q	S	C	W	K	E	R	P	K	D	R	P	T	F	V	Y	L	T	E	F	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	R	L	T	E	L	L	E	R	G	E	R	L	P	R	P	D	K	C	P	A	E	V	Y	H	L	M	K	N	C	W	E	T	E	A	S	F	R	P	T	F	E	N	L	I	P	I	L	K
Template Known Secondary structure											T	T							T	T													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1121	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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