Job Description Q24145 Confidence 100.00% Date Tue Jan 22 11:35:34 GMT 2013 Rank 294 Aligned Residues 219 % Identity 14% Template c3keaB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:k1l; PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function Resolution 2.30 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	N	G	L	P	T	K	L	T	V	P	L	I	R	D	L	P	P	H	N	T	R	S	H	G	V	T	N	L	L	H	R	A	T	S	K	N	E	S	K	V	V	F	E	L	L	K	C	G	Y	R	N	F	D	A	K	N	Q	D	G	Q	T	A	L	H	L	A	A	L	H	S	D	E	D	I	L	K	H
Query Conservation
Alig confidence																	.	.																																			.								.	.
Template Conservation																	.	.																																			.								.	.
Template Sequence		R	I	N	T	W	K	S	K	Q	L	K	S	F	L	S	.	.	S	K	D	T	F	K	A	D	V	H	G	H	S	A	S	Y	Y	A	I	A	D	N	N	V	R	L	V	C	T	L	L	N	A	G	.	A	L	K	N	L	L	E	.	.	N	E	F	P	L	H	Q	A	A	T	L	E	D	T	K	I	V	K	I
Template Known Secondary structure		T	G	G	G												.	.	S	T	T	T	T				T	T	S										T	T											T	T	.	G	G	G	S			T	.	.	T								T	T	S	S	S
Template Predicted Secondary structure																	.	.																																			.								.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	N	A	K	V	Q	V	N	S	S	D	S	F	G	C	Q	P	L	H	Y	A	A	R	S	K	P	A	S	F	I	R	T	L	I	S	A	Q	A	N	V	Q	G	R	N	I	D	N	G	Y	V	P	L	H	E	A	A	K	H	G	N	L	E	A	V	Q	E	L	L	L	A	E	A	P	P	L	P	R	T	S
Query Conservation
Alig confidence																																																																												.
Template Conservation																																																																												.
Template Sequence		L	L	F	S	G	L	D	D	S	Q	F	D	D	K	G	N	T	A	L	Y	Y	A	V	D	S	G	N	X	Q	T	V	K	L	F	V	K	K	N	W	R	L	X	F	Y	G	K	T	G	W	K	T	S	F	Y	H	A	V	X	L	N	D	V	S	I	V	S	Y	F	L	S	E	I	P	S	.	T	F	D	L	A
Template Known Secondary structure					T	T			T	T				T	T	S											T													G	G	G	G	G		S	S	S	G	G	G	S								T	T										T	T	S		T	.	T				S
Template Predicted Secondary structure																																																																												.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	E	F	P	F	D	L	A	K	E	A	G	Q	T	A	V	E	E	F	L	L	N	Y	K	L	P	P	A	N	T	T	R	D	Q	W	Y	H	G	T	L	T	R	E	E	A	V	A	I	L	K	K	H	A	K	E	L	L	A	K	Q	P	E	V	D	T	S
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		I	L	L	S	C	I	H	I	T	I	K	N	G	H	V	D	X	X	I	L	L	L	D	Y	X	T	S	T	N	T	N	N	S	L	L	F	.	.	I	P	D	I	K	L	A	I	D	N	K	D	I	E	X	L	Q	A	L	F	K	Y	D	I	N	I	Y	S	A
Template Known Secondary structure		T											T	T															T		T	T				B		.	.		T	T								T									T	T	S		B		S	T	T	T
Template Predicted Secondary structure																																						.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions