Job Description Q24145 Confidence 99.94% Date Tue Jan 22 11:35:34 GMT 2013 Rank 344 Aligned Residues 169 % Identity 20% Template c3ehrB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:osteoclast-stimulating factor 1; PDBTitle: crystal structure of human osteoclast stimulating factor Resolution 1.95 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.							.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.
Query Sequence		L	T	V	P	L	I	R	D	L	P	P	H	N	T	R	S	H	G	V	T	N	L	L	H	R	A	T	S	K	N	E	S	K	V	V	F	E	L	L	K	C	G	Y	R	N	F	.	.	.	.	.	.	D	A	K	N	Q	D	G	Q	T	A	L	H	L	A	A	L	H	S	D	E	D	I	L	K	H	L	L	N
Query Conservation																																																.	.	.	.	.	.
Alig confidence																																												.				.	.	.	.	.	.
Template Conservation																																												.
Template Sequence		V	F	R	A	L	Y	T	F	E	P	R	T	P	D	E	L	Y	I	E	E	G	D	I	I	Y	I	T	D	X	S	D	T	N	W	W	K	G	T	S	K	G	R	.	T	G	L	I	P	S	N	Y	V	A	E	Q	A	E	S	I	D	N	P	L	H	E	A	A	K	R	G	N	L	S	W	L	R	E	C	L	D
Template Known Secondary structure						S	S		B			S	S	T	T	B			B		T	T										S	S	S							T	T		.																	S										T
Template Predicted Secondary structure																																												.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	V	Q	V	N	S	S	D	S	F	G	C	Q	P	L	H	Y	A	A	R	S	K	P	A	S	F	I	R	T	L	I	S	A	Q	A	N	V	Q	G	R	N	I	D	N	G	Y	V	P	L	H	E	A	A	K	H	G	N	L	E	A	V	Q	E	L	L	L	A	E	A	P	P	L	P	R	T	S	S	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	V	G	V	N	G	L	D	K	A	G	S	T	A	L	Y	W	A	C	H	G	G	H	K	D	I	V	E	X	L	F	T	Q	P	N	I	E	L	N	Q	Q	N	K	L	G	D	T	A	L	H	A	A	A	W	K	G	Y	A	D	I	V	Q	L	L	L	A	K	G	A	R	T	D	L	R	N	I	E	K	K
Template Known Secondary structure		T	T			T	T				T	T	S										T	T									T	T	S	T	T								T	T	S											T												T			S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	F	D	L	A	K	E	A	G	Q	T	A	V	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	F	D	X	A	T	N	A	A	C	A	S	L	L	K
Template Known Secondary structure									S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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