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Job DescriptionQ24145
Confidence100.00%DateTue Jan 22 11:35:34 GMT 2013
Rank303Aligned Residues246
% Identity21%Templatec3e3pB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase, putative glycogen synthase PDBTitle: glycogen synthase kinase from leishmania major
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   660.........670.........680.........690.........700.........710.........720.........730......
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Query Sequence  EKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDEHSNKQEFLREASVMMRLEHKCIVRLIGIAKGEM. . .
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Template Sequence  DRFQVTVQLGKEKS. . . . . . . . . . . . . . . . . TGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD
Template Known Secondary structure  TT


TT.................T



TT




TTB


SS
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   18.20.........30. ........40.........50.........60.........70.........80
 
   737..740.........750... ......760.........770.........780.........790....... ..800.......
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Query Sequence  . . . . . LMMVQELAPLGSMLQYI. LDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNILL. . . TARHQAKISD
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Template Sequence  RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCD
Template Known Secondary structure  TT


S
BTT



TSTTT

B
S


GGGTTTT

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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   808.810.........820.........830.........840.........850.........860.........870.........880
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Query Sequence  FGMSRSLRPGSTEYQFTQGGRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLV. . . . . . .
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Template Sequence  FGSAKKLSPSEPNVAYICSRY. . . YRAPELIFGNQHYTTAVDIWSVGCIFAEMML. GEPIFRGDNSAGQLHEIVRVLGCP
Template Known Secondary structure  GGG
B


TTS


STTS
GG...G

TT
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T.SS
SS

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S
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   171........180.........190. ........200.........210.........220.. .......230.........240......
 
   881........890.........900.........910....... ..920......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . DSGERLPQPNLCPAYIYAVMQSCWKERPKDRPTFVYL. . TEFFARDPD
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Template Sequence  SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD
Template Known Secondary structure 

TT


GGG






T
TT

SSS
SSGGGS

TTSGGGGGGG
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   247..250.........260.........270.........280.........290.........300.........310........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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