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Job DescriptionQ24145
Confidence100.00%DateTue Jan 22 11:35:34 GMT 2013
Rank210Aligned Residues233
% Identity24%Templatec3db8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:polo-like kinase 1; PDBTitle: crystal structure of an activated (thr->asp) polo-like2 kinase 1 (plk1) catalytic domain in complex with compound3 041
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   660.........670.........680.........690.........700. ........710.........720.........730.....
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Query Sequence  EKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLS. . . . DEHSNKQEFLREASVMMRLEHKCIVRLIGIAKGE
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Template Sequence  KRYMRGRFLGKGGFAKCYEIT. . . . . . . DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDD
Template Known Secondary structure 
TT.......TTT

TTTT
STT


TTB


S
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   37..40.........50....... ..60.........70.........80.........90.........100.........
 
   736 ...740.........750.........760.........770.........780.........790.........800.........810....
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Query Sequence  M. LMMVQELAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSL
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Template Sequence  DFVYVVLEICRRRSLLELHKRRKA. . VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI
Template Known Secondary structure  S


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BSS..

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GGG
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TT

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   110.........120.........130... ......140.........150.........160.........170.........180.......
 
   815....820.........830.........840.........850.........860.........870.........880.........890....
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Query Sequence  RPGSTEYQFTQGGRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HSFEVDIWSLGCILYTLLV. GKPPFETSCLKETYIRIKKNE. YSVPRHINP
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T.SS
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   214.....220.........230.. .......240.........250... ......260..
 
   895....900.........910....... ..920.........930..
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Query Sequence  YIYAVMQSCWKERPKDRPTFVYL. . TEFFARDPDYQNLPE
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Template Sequence  VASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPT
Template Known Secondary structure  T
SSGGGS

TSS


S


G
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   263......270.........280.........290.........300..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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