Job Description Q24145 Confidence 100.00% Date Tue Jan 22 11:35:34 GMT 2013 Rank 264 Aligned Residues 250 % Identity 20% Template c3begA_ PDB info PDB header:transferase/splicing Chain: A: PDB Molecule:serine/threonine-protein kinase srpk1; PDBTitle: crystal structure of sr protein kinase 1 complexed to its substrate2 asf/sf2 Resolution 2.90 Å

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		660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.									.	.	.	.	.	.	.	730	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.
Query Sequence		E	K	L	V	L	D	R	E	I	G	H	G	E	F	G	S	V	H	S	G	W	L	L	R	K	S	G	A	G	E	E	S	R	L	E	V	A	I	K	M	L	S	D	E	H	S	N	K	Q	E	F	L	R	E	A	S	V	M	M	R	L	E	H	.	.	.	.	.	.	.	.	K	C	I	V	R	L	I	G	I
Query Conservation																																																																	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		G	R	Y	H	V	I	R	K	L	G	W	G	H	F	S	T	V	W	L	S	W	.	.	.	.	.	.	.	D	I	Q	G	K	K	F	V	A	M	K	V	V	K	S	A	E	H	Y	T	E	T	A	L	D	E	I	R	L	L	K	S	V	R	N	S	D	P	N	D	P	N	R	E	M	V	V	Q	L	L	D	D
Template Known Secondary structure		T	T											S	S								.	.	.	.	.	.	.		S	S	S	S	S									S																				S	S		T	T		T	T	S	T	T	B
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		732	.	.	.	.						.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800
Predicted Secondary structure							.	.	.	.	.																																																																	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.																																																																	.	.	.	.	.	.
Query Sequence		A	K	G	E	M	.	.	.	.	.	L	M	M	V	Q	E	L	A	P	L	G	S	M	L	Q	Y	I	L	D	H	G	H	E	I	T	A	N	A	E	L	K	V	W	A	S	Q	I	A	C	G	M	H	Y	L	E	S	Q	H	F	V	H	R	D	L	A	A	R	N	I	L	L	T	A	R	.	.	.	.	.	.
Query Conservation							.	.	.	.	.																																																																	.	.	.	.	.	.
Alig confidence							.	.	.	.	.																																																																	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	I	S	G	V	N	G	T	H	I	C	M	V	F	E	V	L	G	H	H	L	L	K	W	I	I	K	S	N	Y	Q	G	L	P	L	P	C	V	K	K	I	I	Q	Q	V	L	Q	G	L	D	Y	L	H	T	K	C	R	I	I	H	T	D	I	K	P	E	N	I	L	L	S	V	N	E	Q	Y	I	R	R
Template Known Secondary structure					B		S	S		B												B								T	T	T	S																									S								S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
																							801	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	A	K	I	S	D	F	G	M	S	R	S	L	R	P	G	S	T	E	Y	Q	F	T	Q	G	G	R	W	P	I	R	W	Y	A	P	E	S	F	N	L	G	I	F	S	H	A	S	D	V	W	S	F	G	V	T	I	W	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.
Template Sequence		L	A	A	E	A	A	G	N	F	L	V	N	P	L	E	P	K	N	A	E	K	L	K	V	K	I	A	D	L	G	N	A	C	W	V	H	K	H	.	.	.	.	.	.	F	T	E	D	I	Q	T	R	Q	Y	R	S	L	E	V	L	I	G	S	G	Y	N	T	P	A	D	I	W	S	T	A	C	M	A	F	E
Template Known Secondary structure				T	T						S			S	S		G	G	G	T	T	T									T	T				S	S			.	.	.	.	.	.	S		S			S		G	G	G								T					T
Template Predicted Secondary structure																																								.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.							.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.																																																.	.	.	.	.	.	890	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	F	S	L	G	A	P	P	Y	G	E	I	S	N	V	D	A	I	K	L	V	D	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	L	P	Q	P	N	L	C
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.
Template Sequence		L	A	T	.	G	D	Y	L	F	E	P	H	S	G	E	E	Y	T	R	D	E	D	H	I	A	L	I	I	E	L	L	G	K	V	P	R	K	L	I	V	A	G	K	Y	S	K	E	F	F	T	K	K	G	D	L	K	H	I	T	K	L	K	P	W	G	L	F	E	V	L	V	E	K	Y	E	W	S	Q	E	E
Template Known Secondary structure					.	S	S		S							S	S	S																S							T	T		T	T					B		S	S	S	S	B	S	S			S													T	T				T	T
Template Predicted Secondary structure					.
Template SS confidence
		544	.	.		.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
		893	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.			.	.	920	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		P	A	Y	I	Y	A	V	M	Q	S	C	W	K	E	R	P	K	D	R	P	T	F	V	Y	L	.	.	T	E	F	F	A	R
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		A	A	G	F	T	D	F	L	L	P	M	L	E	L	I	P	E	K	R	A	T	A	A	E	C	L	R	H	P	W	L	N	S
Template Known Secondary structure					T								T		S	S	T	T	T	S								S		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions