Job Description Q24145 Confidence 100.00% Date Tue Jan 22 11:35:34 GMT 2013 Rank 85 Aligned Residues 268 % Identity 22% Template c2wtkB_ PDB info PDB header:transferase/metal-binding protein Chain: B: PDB Molecule:ste20-related kinase adapter protein alpha; PDBTitle: structure of the heterotrimeric lkb1-stradalpha-mo25alpha2 complex Resolution 2.65 Å

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		655	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.			.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700				.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.																														.	.	.
Query SS confidence																			.	.																														.	.	.
Query Sequence		F	F	I	E	P	E	K	L	V	L	D	R	E	I	G	H	G	.	.	E	F	G	S	V	H	S	G	W	L	L	R	K	S	G	A	G	E	E	S	R	L	E	V	A	I	K	M	L	.	.	.	S	D	E	H	S	N	K	Q	E	F	L	R	E	A	S	V	M	M	R	L	E	H	K	C	I	V	R	L	I
Query Conservation																			.	.																														.	.	.
Alig confidence																			.	.										.	.	.	.	.	.	.														.	.	.
Template Conservation																														.	.	.	.	.	.	.
Template Sequence		F	L	P	E	G	G	C	Y	E	L	L	T	V	I	G	K	G	F	E	D	L	M	T	V	N	L	A	R	.	.	.	.	.	.	.	Y	K	P	T	G	E	Y	V	T	V	R	R	I	N	L	E	A	C	S	N	E	M	V	T	F	L	Q	G	E	L	H	V	S	K	L	F	N	H	P	N	I	V	P	Y	R
Template Known Secondary structure						G	G	G											T	T	T	T								.	.	.	.	.	.	.		T	T	T											T	T	S	S																					T	T	B
Template Predicted Secondary structure																														.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		730	.	.	.	.	.	.		.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		G	I	A	K	G	E	M	.	L	M	M	V	Q	E	L	A	P	L	G	S	M	L	Q	Y	I	L	D	H	G	H	E	I	T	A	N	A	E	L	K	V	W	A	S	Q	I	A	C	G	M	H	Y	L	E	S	Q	H	F	V	H	R	D	L	A	A	R	N	I	L	L	T	A	R	H	Q	A	K	I	S	D	F
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		A	T	F	I	A	D	N	E	L	W	V	V	T	S	F	M	A	Y	G	S	A	K	D	L	I	C	T	H	F	M	D	G	M	N	E	L	A	I	A	Y	I	L	Q	G	V	L	K	A	L	D	Y	I	H	H	M	G	Y	V	H	R	S	V	K	A	S	H	I	L	I	S	V	D	G	K	V	Y	L	S	G	L
Template Known Secondary structure							S	S										T	T										T		T	T																								T	T							S	G	G	G					T	T								G
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		809	810	.	.	.	.	.	.					.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.			.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
Predicted Secondary structure										.	.	.	.																											.	.
Query SS confidence										.	.	.	.																											.	.
Query Sequence		G	M	S	R	S	L	R	P	.	.	.	.	G	S	T	E	Y	Q	F	T	Q	G	G	R	W	P	I	R	W	Y	A	P	E	S	F	N	L	G	.	.	I	F	S	H	A	S	D	V	W	S	F	G	V	T	I	W	E	M	F	S	L	G	A	P	P	Y	G	E	I	S	N	V	D	A	I	K	L	V	D	S
Query Conservation										.	.	.	.																											.	.
Alig confidence										.	.	.	.																											.	.																					.																		.	.
Template Conservation																																																														.																		.	.
Template Sequence		R	S	N	L	S	M	I	S	H	G	Q	R	Q	R	V	V	H	D	F	P	K	Y	S	V	K	V	L	P	W	L	S	P	E	V	L	Q	Q	N	L	Q	G	Y	D	A	K	S	D	I	Y	S	V	G	I	T	A	C	E	L	A	N	.	G	H	V	P	F	D	M	P	A	T	Q	M	L	L	E	K	L	.	.
Template Known Secondary structure		G	G							T	T				S		B					S	S		G	G	G	G	G	G	S						S			T	T		B		T																	.	S	S													T	T		.	.
Template Predicted Secondary structure																																																														.																		.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		883	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.			.	.	920	.	.	.			.	.	.	.	.	.	930	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.							.	.
Query SS confidence																																					.	.							.	.
Query Sequence		G	E	R	L	P	Q	P	N	L	C	P	A	Y	I	Y	A	V	M	Q	S	C	W	K	E	R	P	K	D	R	P	T	F	V	Y	L	.	.	T	E	F	F	A	R	.	.	D	P	D	Y	Q	N	L	P	E	L	V	Q	T	V
Query Conservation																																					.	.							.	.
Alig confidence		.	.	.	.	.																															.	.							.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	V	P	C	L	F	S	P	H	F	H	H	F	V	E	Q	C	L	Q	R	N	P	D	A	R	P	S	A	S	T	L	L	N	H	S	F	F	K	Q	I	K	R	R	A	S	E	A	L	P	E	L	L	R	P	V
Template Known Secondary structure		.	.	.	.	.																	T		S	S	G	G	G	S								T		G	G	G	T	T			S		G	G	G	T	G	G	G	T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions