Job Description Q24145 Confidence 100.00% Date Tue Jan 22 11:35:34 GMT 2013 Rank 122 Aligned Residues 233 % Identity 20% Template c2wqmA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase nek7; PDBTitle: structure of apo human nek7 Resolution 2.10 Å

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		660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.					.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		E	K	L	V	L	D	R	E	I	G	H	G	E	F	G	S	V	H	S	G	W	L	L	R	K	S	G	A	G	E	E	S	R	L	E	V	A	I	K	M	L	S	.	.	.	.	D	E	H	S	N	K	Q	E	F	L	R	E	A	S	V	M	M	R	L	E	H	K	C	I	V	R	L	I	G	I	A	K	G	E
Query Conservation																																												.	.	.	.
Alig confidence														.	.								.	.	.	.	.	.	.															.	.	.	.
Template Conservation														.	.								.	.	.	.	.	.	.
Template Sequence		A	N	F	R	I	E	K	K	I	G	R	G	.	.	S	E	V	Y	R	A	A	.	.	.	.	.	.	.	C	L	L	D	G	V	P	V	A	L	K	K	V	Q	I	F	D	L	M	D	A	K	A	R	A	D	C	I	K	E	I	D	L	L	K	Q	L	N	H	P	N	V	I	K	Y	Y	A	S	F	I	E	D
Template Known Secondary structure		G	G											.	.								.	.	.	.	.	.	.		T	T	T											T	T	S	S																		T				T	T	B										T
Template Predicted Secondary structure														.	.								.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		736		.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.			.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.
Predicted Secondary structure			.																				.	.
Query SS confidence			.																				.	.
Query Sequence		M	.	L	M	M	V	Q	E	L	A	P	L	G	S	M	L	Q	Y	I	L	D	.	.	H	G	H	E	I	T	A	N	A	E	L	K	V	W	A	S	Q	I	A	C	G	M	H	Y	L	E	S	Q	H	F	V	H	R	D	L	A	A	R	N	I	L	L	T	A	R	H	Q	A	K	I	S	D	F	G	M	S	R
Query Conservation			.																				.	.
Alig confidence			.																				.	.																																																						.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		N	E	L	N	I	V	L	E	L	A	D	A	G	D	L	S	R	M	I	K	H	F	K	K	Q	K	R	L	I	P	E	R	T	V	W	K	Y	F	V	Q	L	C	S	A	L	E	H	M	H	S	R	R	V	M	H	R	D	I	K	P	A	N	V	F	I	T	A	T	G	V	V	K	L	G	D	L	.	.	.	.
Template Known Secondary structure		T											S		B											T	T																									T	T								G	G	G					T	T	S								.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		813	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	R	P	G	S	T	E	Y	Q	F	T	Q	G	G	R	W	P	I	R	W	Y	A	P	E	S	F	N	L	G	I	F	S	H	A	S	D	V	W	S	F	G	V	T	I	W	E	M	F	S	L	G	A	P	P	Y	G	E	I	S	N	V	D	A	I	K	L	V	D	S	G	E	R	L	P	Q	P	N	L	C
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	Y	Y	M	S	P	E	R	I	H	E	N	G	Y	N	F	K	S	D	I	W	S	L	G	C	L	L	Y	E	M	A	A	.	L	Q	S	P	F	Y	M	N	L	Y	S	L	C	K	K	I	E	Q	C	D	Y	P	P	L	P	S	D	H	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S							T	T																						.	S	S		T	T													T	T		S					T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
																			199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		893	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	Y	I	Y	A	V	M	Q	S	C	W	K	E	R	P	K	D	R	P	T	F	V	Y	L	T	E	F	F	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	E	L	R	Q	L	V	N	M	C	I	N	P	D	P	E	K	R	P	D	V	T	Y	V	Y	D	V	A	K	R
Template Known Secondary structure													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions