Job Description Q24145 Confidence 99.97% Date Tue Jan 22 11:35:34 GMT 2013 Rank 323 Aligned Residues 164 % Identity 24% Template c2vgeA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rela-associated inhibitor; PDBTitle: crystal structure of the c-terminal region of human iaspp Resolution 2.10 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	H	G	V	T	N	L	L	H	R	A	T	S	K	N	E	S	K	V	V	F	E	L	L	K	C	G	Y	R	N	F	D	A	K	N	Q	D	G	Q	T	A	L	H	L	A	A	L	H	S	D	E	D	I	L	K	H	L	L	N	A	K	V	Q	V	N	S	S	D	S	F	G	C	Q	P	L	H	Y	A	A
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		A	R	L	N	P	L	V	L	L	L	D	A	A	L	T	G	E	L	E	V	V	Q	Q	A	V	K	E	M	.	N	D	P	S	Q	P	N	E	E	G	I	T	A	L	H	N	A	I	C	G	A	N	Y	S	I	V	D	F	L	I	T	A	G	A	N	V	N	S	P	D	S	H	G	W	T	P	L	H	C	A	A
Template Known Secondary structure		T	T	S													T												S	.	S		T	T				T	T	S										T	T											T	T			T	T				T	T
Template Predicted Secondary structure																														.
Template SS confidence
		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650		.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	S	K	P	A	S	F	I	R	T	L	I	S	A	Q	A	N	V	Q	G	R	N	I	D	N	G	Y	V	P	L	H	E	A	A	K	.	.	H	G	N	L	E	A	V	Q	E	L	L	L	A	E	A	P	P	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	C	N	D	T	V	I	C	M	A	L	V	Q	H	G	A	A	I	F	A	T	T	L	S	D	G	A	T	A	F	E	K	C	D	P	Y	R	E	G	Y	A	D	C	A	T	Y	L	A	D	V	E	Q	S	M	G	L	M	N	S	G	A	V	Y	A	L	W	D	Y	S	A	E	F	G	D	E	L	S	F	R	E
Template Known Secondary structure			T	T										T	T	T			T	T				S	S	T	T			T	G	G	G			T	T	S	T	T															T	T	T	S	G	G	G					S	S		B			S	S	T	T	B			B		T
Template Predicted Secondary structure
Template SS confidence
		702	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.
										250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure		.	.	.	.	.	.	.	.																						.
Query SS confidence		.	.	.	.	.	.	.	.																						.
Query Sequence		.	.	.	.	.	.	.	.	R	T	S	S	G	E	F	P	F	D	L	A	K	E	A	G	Q	T	A	V	E	.	E	F	L	L	N	Y	K	L	P	P
Query Conservation		.	.	.	.	.	.	.	.																						.
Alig confidence		.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		G	E	S	V	T	V	L	R	R	D	G	P	E	E	T	D	W	W	W	A	A	L	H	G	Q	E	G	Y	V	P	R	N	Y	F	G	L	F	P	R	V
Template Known Secondary structure		T								S	S		T	T		S	S							T	T							G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		782	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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