Job Description Q24145 Confidence 100.00% Date Tue Jan 22 11:35:34 GMT 2013 Rank 203 Aligned Residues 256 % Identity 16% Template c2v62A_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase vrk2; PDBTitle: structure of vaccinia-related kinase 2 Resolution 1.7 Å

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		659	660	.	.	.	.	.	.	.	.	.	670					.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.															.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure														.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	K	L	V	L	D	R	E	I	G	H	.	.	.	.	G	E	F	G	S	V	H	S	G	W	L	L	R	K	S	G	A	G	E	E	S	R	L	E	V	A	I	K	M	L	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	S	N	K	Q	E	F	L	R	E	A	S	V	M	M	R	L
Query Conservation														.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.											.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.
Template Sequence		P	E	G	K	V	L	D	D	M	E	G	N	Q	W	V	L	G	K	K	I	L	I	Y	L	A	F	.	.	.	.	.	.	.	P	T	N	K	P	E	K	D	A	R	H	V	V	K	V	E	Y	Q	E	G	P	L	F	S	E	L	K	F	Y	Q	R	V	A	K	K	D	C	I	K	K	W	I	E	R	K	Q	L
Template Known Secondary structure			T	T						T	T	S																.	.	.	.	.	.	.		S	S	S		G	G	G																																						T
Template Predicted Secondary structure																												.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.								.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		721	.	.	.	.	.	.	.	.	730	.	.						.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		E	H	K	C	I	V	R	L	I	G	I	A	.	.	.	.	.	K	G	E	M	L	M	M	V	Q	E	L	A	P	L	G	S	M	L	Q	Y	I	L	D	H	G	H	E	I	T	A	N	A	E	L	K	V	W	A	S	Q	I	A	C	G	M	H	Y	L	E	S	Q	H	F	V	H	R	D	L	A	A	R	N	I
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.													.														.	.
Template Conservation																															.														.	.
Template Sequence		D	Y	L	G	I	P	L	F	Y	G	S	G	L	T	E	F	K	G	R	S	Y	R	F	M	V	M	E	R	L	.	G	I	D	L	Q	K	I	S	G	Q	N	G	T	.	.	F	K	K	S	T	V	L	Q	L	G	I	R	M	L	D	V	L	E	Y	I	H	E	N	E	Y	V	H	G	D	I	K	A	A	N	L
Template Known Secondary structure		S															S	S	S												.									B	G	G	G	B	.	.																							T	T				S			S	G	G	G
Template Predicted Secondary structure																															.														.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		796	.	.	.			800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.					.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																													.	.	.	.
Query SS confidence						.	.																													.	.	.	.
Query Sequence		L	L	T	A	.	.	R	H	Q	A	K	I	S	D	F	G	M	S	R	S	L	R	P	G	S	T	E	Y	Q	F	T	Q	G	G	.	.	.	.	R	W	P	I	R	W	Y	A	P	E	S	F	N	L	G	I	F	S	H	A	S	D	V	W	S	F	G	V	T	I	W	E	M	F	S	L	G	A	P	P	Y	G
Query Conservation						.	.																													.	.	.	.
Alig confidence						.	.																													.	.	.	.																																				.
Template Conservation																																																																											.
Template Sequence		L	L	G	Y	K	N	P	D	Q	V	Y	L	A	D	Y	G	L	S	Y	R	Y	C	P	N	G	N	H	K	Q	Y	Q	E	N	P	R	K	G	H	N	G	T	I	E	F	T	S	L	D	A	H	K	G	V	A	L	S	R	R	S	D	V	E	I	L	G	Y	C	M	L	R	W	L	C	.	G	K	L	P	W	E
Template Known Secondary structure					S	S	S	T	T	S							T	T				S	S	G	G	G									G	G	G		S		S		T	T	T								T																						.	S	S		T	T	G
Template Predicted Secondary structure																																																																											.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.
		870	.	.	.	.	.	.	.	.	.	880	.	.	.											.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	S	N	V	D	A	I	K	L	V	D	S	G	.	.	.	.	.	.	.	.	.	.	E	R	L	P	Q	P	N	L	C	P	A	Y	I	Y	A	V	M	Q	S	C	W	K	E	R	P	K	D	R	P	T	F	V	Y	L	T	E	F	F	A	R	D	P
Query Conservation																.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	N	L	K	D	P	V	A	V	Q	T	A	K	T	N	L	L	D	E	L	P	Q	S	V	L	K	W	A	P	S	G	S	S	C	C	E	I	A	Q	F	L	V	C	A	H	S	L	A	Y	D	E	K	P	N	Y	Q	A	L	K	K	I	L	N	P	H	G
Template Known Secondary structure		G	G	T	T															T	T	T							S		T	T	S														T			T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions