361 c2rfaA_ Probab=99.91   E-value=1.2e-22  Score=149.94  Aligned_columns=160  Identities=26%

Q ss_pred             CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC--------------
Q ss_conf             877999999929689999999718988312788878989999980989999999987977643778--------------
Q batch____       120 VTNLLHRATSKNESKVVFELLKCGYRNFDAKNQDGQTALHLAALHSDEDILKHLLNAKVQVNSSDS--------------  185 (939)
Q Consensus       120 ~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~lh~A~~~~~~~~~~~ll~~~a~~~~~~~--------------  185 (939)
                      +.||||+|+..|+.++|+.||...++|+|.+|.+|+||||+||..|+.+++++|+..+++....+.              
T Consensus         2 ~eTpLh~A~~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (222)
T c2rfaA_           2 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA   81 (222)
T ss_dssp             TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred             CCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             73778999980999999999996686355679887899999996200222222222222222222222222222222222


Q ss_pred             -------------------------------------CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf             -------------------------------------8875999999839699999999759973343776441089999
Q batch____       186 -------------------------------------FGCQPLHYAARSKPASFIRTLISAQANVQGRNIDNGYVPLHEA  228 (939)
Q Consensus       186 -------------------------------------~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a  228 (939)
                                                           .|.+..+.+...........+............ ...+....+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  160 (222)
T c2rfaA_          82 VINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDS-LGNTVLHIL  160 (222)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCEEE
T ss_conf             2222222222101368611223455543223453111787101122222222222222222222222222-222210000


Q ss_pred             HHCCCHHHHHHHHHC----------CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCC
Q ss_conf             981998999999975----------8898889988999889999779289999998446654
Q batch____       229 AKHGNLEAVQELLLA----------EAPPLPRTSSGEFPFDLAKEAGQTAVEEFLLNYKLPP  280 (939)
Q Consensus       229 ~~~~~~~~~~~Ll~~----------~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~  280 (939)
                      ...+...........          +.+++.+|..|+||||+|+.+|+.++|++|+++|+++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~LL~~GAdI  222 (222)
T c2rfaA_         161 ILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI  222 (222)
T ss_dssp             HTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
T ss_conf             02586222210012232027656545422468897579899999809999999999789899


