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Job DescriptionQ24145
Confidence100.00%DateTue Jan 22 11:35:34 GMT 2013
Rank178Aligned Residues240
% Identity41%Templatec2qofA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ephrin receptor; PDBTitle: human epha3 kinase and juxtamembrane region, y596f mutant
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   657..660.........670.........680.........690.........700... ......710.........720.........730....
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Query Sequence  IEPEKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDE. . HSNKQEFLREASVMMRLEHKCIVRLIGIAKG
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Template Sequence  LDATNISIDKVVGAGEFGEVCSGRLKL. . . . PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK
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GGG
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   616...620.........630.........640.. .......650.........660.........670.........680.........690.
 
   735. ...740.........750.........760.........770.........780.........790.........800.........810...
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Query Sequence  EM. LMMVQELAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRS
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Template Sequence  SKPVMIVTEYMENGSLDSFLRKHDAQ. FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFPIR. .
Template Known Secondary structure  SSS


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   692.......700.........710....... ..720.........730.........740.........750.........760........
 
   814.....820.........830.........840.........850.........860.........870.........880.........890...
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Query Sequence  LRPGSTEYQFTQGGRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCP
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Template Sequence  . . . . . . . . . . . . . . . . . . . WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP
Template Known Secondary structure  ...................GS




TTS

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   790.........800.........810.........820.........830.........840.........850
 
   894.....900.........910.........920..
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Query Sequence  AYIYAVMQSCWKERPKDRPTFVYLTEFFA
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Template Sequence  AALYQLMLDCWQKDRNNRPKFEQIVSILD
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SSGGGS

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   851........860.........870.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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