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Job DescriptionQ24145
Confidence100.00%DateTue Jan 22 11:35:34 GMT 2013
Rank272Aligned Residues261
% Identity23%Templatec2ojiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 1; PDBTitle: crystal structure of erk2 in complex with n-benzyl-4-(4-(3-2 chlorophenyl)-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   659660.........670.........680.........690.........700.. .......710.........720.........730....
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Query Sequence  PEKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSD. . EHSNKQEFLREASVMMRLEHKCIVRLIGIAKG. .
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Template Sequence  GPRYTNLSYIGEGAYGMVCSAY. . . . . . . DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT
Template Known Secondary structure 
SSTT.......TTTT

TTS


TTB





SS
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   20.........30.........40. ........50.........60.........70.........80.........90..
 
   735....740.........750.........760.........770.........780.........790.........800.........810
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Query Sequence  . . . . EMLMMVQELAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGM
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Template Sequence  IEQMKDVYIVQDLMETDLYKLLK. . . . TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL
Template Known Secondary structure  TTT





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GGG
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   93......100.........110..... ....120.........130.........140.........150.........160........
 
   811........820.........830.... .....840.........850.........860.........870.........880.........
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Query Sequence  SRSLRPGSTEYQFTQGGRWPIRWY. APESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQP
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Template Sequence  ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS. NRPIFPGKHYLDQLNHILGILGSPSQ
Template Known Secondary structure 


GGG
B

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S
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   169170.........180.........190.........200.........210.........220. ........230.........240.......
 
   890.........900.........910....... ..920.........930.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NLCPAYIYAVMQSCWKERPKDRPTFVYL. . TEFFARDPDYQNLP
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Template Sequence  EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP
Template Known Secondary structure  S


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TTS
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TSGGGTTT

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   248.250.........260.........270.........280.........290.........300.........310.........320.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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