Job Description Q24145 Confidence 100.00% Date Tue Jan 22 11:35:34 GMT 2013 Rank 297 Aligned Residues 231 % Identity 28% Template c2oidA_ PDB info PDB header:transferase Chain: A: PDB Molecule:interleukin-1 receptor-associated kinase 4; PDBTitle: crystal structure of irak4 kinase domain complexed with2 amppnp Resolution 2.30 Å

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		657	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	P	E	K	L	V	L	D	R	E	I	G	H	G	E	F	G	S	V	H	S	G	W	L	L	R	K	S	G	A	G	E	E	S	R	L	E	V	A	I	K	M	L	S	D	E	H	S	N	K	Q	E	F	L	R	E	A	S	V	M	M	R	L	E	H	K	C	I	V	R	L	I	G	I	A	K	G	E	M
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Sequence		F	D	E	R	P	I	S	V	G	G	N	K	G	E	G	G	F	G	V	V	Y	K	G	Y	V	.	.	.	.	.	.	.	.	.	N	N	T	T	V	A	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	I	K	V	M	A	K	C	Q	H	E	N	L	V	E	L	L	G	F	S	.	.	.	.
Template Known Secondary structure		T			S		G	G	G	T	S						T	T									.	.	.	.	.	.	.	.	.	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	B								.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.										.	.	.	.	.	210	.	.														.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		737	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.		.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		L	M	M	V	Q	E	L	A	P	L	G	S	M	L	Q	Y	I	.	L	D	H	G	H	E	I	T	A	N	A	E	L	K	V	W	A	S	Q	I	A	C	G	M	H	Y	L	E	S	Q	H	F	V	H	R	D	L	A	A	R	N	I	L	L	T	A	R	H	Q	A	K	I	S	D	F	G	M	S	R	S	L	R
Query Conservation																			.
Alig confidence		.																	.																																																												.	.	.
Template Conservation		.																																																																													.	.	.
Template Sequence		.	C	L	V	Y	V	Y	M	P	N	G	S	L	L	D	R	L	S	C	L	D	G	T	P	P	L	S	W	H	M	R	C	K	I	A	Q	G	A	A	N	G	I	N	F	L	H	E	N	H	H	I	H	R	D	I	K	S	A	N	I	L	L	D	E	A	F	T	A	K	I	S	D	F	G	L	A	R	.	.	.
Template Known Secondary structure		.								T	T		B						T	T	G	G	G																										T	T				S			S	G	G	G					T	T									S	S			.	.	.
Template Predicted Secondary structure		.																																																																													.	.	.
Template SS confidence
			259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		816	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.															.	.	880	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	S	T	E	Y	Q	F	T	Q	G	G	R	W	P	I	R	W	Y	A	P	E	S	F	N	L	G	I	F	S	H	A	S	D	V	W	S	F	G	V	T	I	W	E	M	F	S	L	G	A	P	P	Y	G	E	I	S	N	V	D	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	V	D
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																										.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																										.
Template Sequence		.	.	.	.	.	.	A	S	E	V	M	R	I	V	G	T	T	A	Y	M	A	P	E	A	L	R	G	E	I	T	P	K	S	D	I	Y	S	F	G	V	V	L	L	E	I	I	T	.	G	L	P	A	V	D	E	H	R	E	P	Q	L	L	L	D	I	K	E	E	I	E	D	E	E	K	T	I	E	D	Y	I
Template Known Secondary structure		.	.	.	.	.	.									S		G	G	G			T	T	T	T	T	T																					.				S	B		T	T	S	S	S	S	B	G	G	G							T	T	S	S						S
Template Predicted Secondary structure		.	.	.	.	.	.																																										.
Template SS confidence
								335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		882	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	E	R	L	P	Q	P	N	L	C	P	A	Y	I	Y	A	V	M	Q	S	C	W	K	E	R	P	K	D	R	P	T	F	V	Y	L	T	E	F	F	A	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	K	M	N	D	A	D	S	T	S	V	E	A	M	Y	S	V	A	S	Q	C	L	H	E	K	K	N	K	R	P	D	I	K	K	V	Q	Q	L	L	Q	E	M
Template Known Secondary structure			S	S		S																		T		S	S	T	T	T	S													T
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions