Return to main results Retrieve Phyre Job Id

Job DescriptionQ24145
Confidence97.26%DateTue Jan 22 11:35:34 GMT 2013
Rank479Aligned Residues82
% Identity34%Templatec2lctA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  RDSDPMKWYHGNLSREAADELLKQGYEDGTFLVRESSTAAGDFVLSLLCQGEVCHYQVRRHGGEDAFFSIDDKVQTKILH
Query Conservation           
          

      
  
           
  
                                 
Alig confidence 





















.











































......






Template Conservation    
    

 
 


  

 

.     
 



 
        


       
  
        
......     
 
Template Sequence  QDLSVHLWYAGPMERAGAESIL. ANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRI. . . . . . TEKKAFR
Template Known Secondary structure  S
STTSSSS

.S
TTB

SSS
S
SSS
TTS......SSSSS
Template Predicted Secondary structure 











.

















......






Template SS confidence 















































































   664.....670.........680..... ....690.........700.........710.........720......... 730......
 
   83......90.
Predicted Secondary structure 
Query SS confidence 








Query Sequence  GLDTLVDYY
Query Conservation           
Alig confidence 








Template Conservation 

  

  
Template Sequence  GLTELVEFY
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 








   737..740.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions