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Job DescriptionQ24145
Confidence100.00%DateTue Jan 22 11:35:34 GMT 2013
Rank280Aligned Residues201
% Identity21%Templatec2exeA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase clk3; PDBTitle: crystal structure of the phosphorylated clk3
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   712.......720.........730.........740.........750.........760.........770.........780.........790.
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Query Sequence  REASVMMRLEHKCIVRLIGIAKGEMLMMVQELAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLA
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Template Sequence  LEINVLKKIKEKFLCVL. . . . . . . . MSDAFELL. GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLK
Template Known Secondary structure  T


B

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B


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BTTTT



TTT




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   200.........210...... ...220.... .....230.........240.........250.........260.........270
 
   792.......800.. .......810.........820.........830.........840.........850.......
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Query Sequence  ARNILLTARHQ. . . . . . . . . . . . . . AKISDFGMSRSLRPGSTEYQFTQGGRWPIRWYAPESFNLGIFSHASDVWSFGVTI
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Template Sequence  PENILFVNSEFETLYNEEKSVKNTSIRVADFGSATFDHEH. . . . . . HTTIVATRHYRPPEVILELGWAQPCDVWSIGCIL
Template Known Secondary structure  GGG

B


B



GGG
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SS
S
GGG

TT


ST
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   286...290.........300.........310.........320..... ....330.........340.........350.........
 
   858.860.........870.........880.. .......890....
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Query Sequence  WEMFSLGAPPYGEISNVDAIKLVDS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GERLPQPNLCPA
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Template Sequence  FEYYR. GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV
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S


SS




S
GGGTT


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GGGG
S

S
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   365.... 370.........380.........390.........400.........410.........420.........430.........440...
 
   895....900.........910....... ..920........
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Query Sequence  YIYAVMQSCWKERPKDRPTFVYL. . TEFFARDPDYQ
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Template Sequence  QLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEE
Template Known Secondary structure  T
S
TTTS

TSGGGGGS
S

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   444.....450.........460.........470.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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