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Job DescriptionQ24145
Confidence100.00%DateTue Jan 22 11:35:34 GMT 2013
Rank128Aligned Residues258
% Identity25%Templatec2cn5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: crystal structure of human chk2 in complex with adp
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   660.........670.........680.........690.........700.........710.........720.........730.........
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Query Sequence  EKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDEHSNKQEFLREASVMMRLEHKCIVRLIGIAKGEMLMM
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Template Sequence  DEYIMSKTLGSGACGEVKLAF. . . . . . . ERKTCKKVAIKIISKRN. . . . . VETEIEILKKLNHPCIIKIKNFFDAEDYYI
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   218.220.........230........ .240.........250..... ....260.........270.........280.....
 
   740.........750.........760.........770.........780.........790......... 800.........810......
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Query Sequence  VQELAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNILLTA. . . RHQAKISDFGMSRSLRP
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Template Sequence  VLELMEGGELFDKV. . VGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE
Template Known Secondary structure 

TT
BGGGGT..
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   300.........310... ......320.........330.........340.........350.........360.........370.......
 
   817..820.........830.........840. ........850.........860.........870... ......880.........
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Query Sequence  GSTEYQFTQGGRWPIRWYAPESFNL. . . GIFSHASDVWSFGVTIWEMFSLGAPPYGEISN. VDAIKLVDSGERLPQP. . .
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Template Sequence  T. . . . SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS. GYPPFSEHRTQVSLKDQITSGKYNFIPEVW
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GGG

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   378 .380.........390.........400.........410.........420.. .......430.........440.........450..
 
   890.........900.........910....... ..920.........930......
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Query Sequence  NLCPAYIYAVMQSCWKERPKDRPTFVYL. . TEFFARDPDYQNLPELVQT
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Template Sequence  AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSE
Template Known Secondary structure  TTS
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SSTTTS

TSGGG

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   453......460.........470.........480.........490.........500.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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