Return to main results Retrieve Phyre Job Id

Job DescriptionQ24145
Confidence100.00%DateTue Jan 22 11:35:34 GMT 2013
Rank171Aligned Residues243
% Identity22%Templatec2bvaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:p21-activated kinase 4; PDBTitle: crystal structure of the human p21-activated kinase 4
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   669670.........680.........690.........700.........710.........720.........730...... ...740.......
Predicted Secondary structure 

























.




Query SS confidence 



































































.










Query Sequence  GHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDEHSNKQEFLREASVMMRLEHKCIVRLIGIAKGEM. LMMVQELAPLG
Query Conservation 
 
 

 

 
               



 
            
  

  
 

 

 
        .   
 
    
Alig confidence 











.......














.......


























.










Template Conservation     


 

   .......       



 
  .......   
  

  
 




             



   
 
Template Sequence  NFIKIGIVCIAT. . . . . . . VRSSGKLVAVKKMDL. . . . . . . LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG
Template Known Secondary structure 











.......BTTS










.......TS


TTB

SSS




S
Template Predicted Secondary structure 

.......



.......










Template SS confidence 















































































   323......330.... .....340......... 350.........360.........370.........380........
 
   748.750.........760.........770.........780.........790.........800.........810.........820.......
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  SMLQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQGG
Query Conservation   
   
                  

  

 


   






  



      

 



                 
Alig confidence 









...
























































......



Template Conservation            ...                
                                        ......    
Template Sequence  ALTDIVTHTR. . . MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVEVP. . . . . . RRKL
Template Known Secondary structure  BTTTS
...

TTB

S

SGGG
TTS



TT

B



......
B

Template Predicted Secondary structure 









...





























......



Template SS confidence 















































































   402.......410. ........420.........430.........440.........450.........460........ .470..
 
   828.830.........840.........850.........860.........870.........880.... .....890.........900.....
Predicted Secondary structure 






















..










Query SS confidence 
























































. .




















Query Sequence  RWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGE. . RLPQPNLCPAYIYAVMQSCWK
Query Conservation         


           

 
 
    
    
  
                 ..    
             
  
Alig confidence 


































.




















..




















Template Conservation                       













.
  

           
              
     

  

 
Template Sequence  VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD. GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV
Template Known Secondary structure 
S
GGG

TT

B
TT.SS
TTTTS
TS




S

TT



Template Predicted Secondary structure 


















.





















Template SS confidence 















































































   476...480.........490.........500.........510 .........520.........530.........540.........550....
 
   906...910....... ..920.........930.....
Predicted Secondary structure 




..



Query SS confidence 











. .

















Query Sequence  ERPKDRPTFVYL. . TEFFARDPDYQNLPELVQ
Query Conservation    
  

    
..                  
Alig confidence 











..

















Template Conservation   

  


  


 

             
  
Template Sequence  RDPAQRATAAELLKHPFLAKAGPPASIVPLMR
Template Known Secondary structure  SSGGGS

TT
GGGGG



Template Predicted Secondary structure 















Template SS confidence 































   555....560.........570.........580......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions