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Job DescriptionQ24145
Confidence100.00%DateTue Jan 22 11:35:34 GMT 2013
Rank72Aligned Residues236
% Identity26%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   660.........670.........680.........690.........700...... ...710.........720.........730.....
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Query Sequence  EKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDEHSN. . . . KQEFLREASVMMRLEHKCIVRLIGIAKGE
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Template Sequence  EDFEIGRPLGKGKFGNVYLAR. . . . . . . EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA
Template Known Secondary structure  GG
SS.......TTT

TT
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TTB


S
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   131........140.........150. ........160.........170.........180.........190.........200...
 
   736 ...740.........750.........760.........770.........780.........790.........800.........810....
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Query Sequence  M. LMMVQELAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSL
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Template Sequence  TRVYLILEYAPLGTVYRELQKLSK. . FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . .
Template Known Secondary structure  S


TT
BSS..

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GGG
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   204.....210.........220....... ..230.........240.........250.........260.........270........
 
   815....820.........830.........840.........850.........860.........870.........880.........890....
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Query Sequence  RPGSTEYQFTQGGRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPA
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Template Sequence  . . . . . . . . . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRVE. FTFPDFVTE
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GGG

GGGTTTTSSGGG.SS
TT

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   279280.........290.........300.........310.. .......320.........330... ......340..
 
   895....900.........910....... ..920...
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Query Sequence  YIYAVMQSCWKERPKDRPTFVYL. . TEFFAR
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Template Sequence  GARDLISRLLKHNPSQRPMLREVLEHPWITA
Template Known Secondary structure  S
SSGGGS

T
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   355....360.........370.........380.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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