Job Description Q24145 Confidence 99.97% Date Tue Jan 22 11:35:34 GMT 2013 Rank 320 Aligned Residues 204 % Identity 15% Template c1sw6A_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:regulatory protein swi6; PDBTitle: s. cerevisiae swi6 ankyrin-repeat fragment Resolution 2.10 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		L	D	T	L	V	D	Y	Y	Q	Q	A	A	N	G	L	P	T	K	L	T	V	P	L	I	R	D	L	P	P	H	N	T	R	.	S	H	G	V	T	N	L	L	H	R	A	T	S	K	N	E	S	K	V	V	F	E	L	L	K	C	G	Y	R	N	F	D	A	K	N	Q	D	G	Q	T	A	L	H	L	A	A
Query Conservation																																			.
Alig confidence																																			.																												.
Template Conservation																																																															.
Template Sequence		L	E	A	F	L	Q	R	L	L	F	S	F	D	S	L	L	Q	E	V	N	D	A	F	P	N	T	Q	L	N	L	N	I	P	V	D	E	H	G	N	T	P	L	H	W	L	T	S	I	A	N	L	E	L	V	K	H	L	V	K	H	G	.	S	N	R	L	Y	G	D	N	M	G	E	S	C	L	V	K	A	V
Template Known Secondary structure																									T	T	S				S		S			S	T	T											T	T											T	T	.			T	T	B			T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		163	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																																																	.
Query SS confidence							.	.	.	.																																																	.
Query Sequence		L	H	S	D	E	.	.	.	.	D	I	L	K	H	L	L	N	A	K	V	Q	V	N	S	S	D	S	F	G	C	Q	P	L	H	Y	A	A	R	S	K	P	A	S	F	I	R	T	L	I	S	A	Q	A	N	V	Q	G	.	R	N	I	D	N	G	Y	V	P	L	H	E	A	A	K	H	G	N	L	E	A	V
Query Conservation							.	.	.	.																																																	.
Alig confidence							.	.	.	.																																																	.
Template Conservation
Template Sequence		K	S	V	N	N	Y	D	S	G	T	F	E	A	L	L	D	Y	L	Y	P	C	L	I	L	E	D	S	M	N	R	T	I	L	H	H	I	I	I	T	S	G	M	T	G	C	S	A	A	A	K	Y	Y	L	D	I	L	M	G	W	I	V	K	K	Q	N	R	P	I	Q	S	G	D	S	I	L	E	N	L	D	L
Template Known Secondary structure			S	S					T	T										G	G	G	G	G				T	T													T	S	T	T																			G	G	G														S
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	L	L	L	A	E	A	P	P	L	P	R	T	S	S	G	E	F	P	F	D	L	A	K	E	A	G	Q	T	A	V	E	E	F	L	L	N	Y	K	L	P	P	A	N	T	T	R	D	Q	W	Y	H
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		K	W	I	I	.	.	A	N	M	L	N	A	Q	D	S	N	G	D	T	C	L	N	I	A	A	R	L	G	N	I	S	I	V	D	A	L	L	D	Y	G	A	D	P	F	I	A	N	K	S	G	L	R	P
Template Known Secondary structure						.	.			T	T	T				T	T	S																						T	T			T	T				T	T	S			G
Template Predicted Secondary structure						.	.
Template SS confidence
		456	.	.	.			460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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