Job Description Q9VX18 Confidence 20.45% Date Tue Jan 22 11:47:38 GMT 2013 Rank 174 Aligned Residues 82 % Identity 15% Template d1ng0c_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Tombusviridae-like VP Resolution 2.70

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		G	N	V	G	G	G	G	V	A	G	G	G	G	S	G	S	G	G	V	C	V	S	S	I	C	S	S	D	S	F	S	I	M	P	P	P	H	H	E	L	V	S	A	N	S	I	E	L	N	A	A	A	S	L	S	D	D	S	G	V	P	L	T	T	N	S	S	I	S	S	G	D	S	Y	R	L	G	.	.	M
Query Conservation																																																																															.	.
Alig confidence																																				.	.	.	.	.																																							.	.
Template Conservation																																				.	.	.	.	.
Template Sequence		G	G	D	G	S	S	L	L	H	T	S	M	K	S	M	G	N	A	V	T	S	A	L	P	C	D	E	F	S	N	K	W	F	K	.	.	.	.	.	L	S	W	S	T	P	E	E	S	E	N	A	H	L	T	D	T	Y	V	P	A	R	F	V	V	R	S	D	F	P	V	V	T	A	D	Q	P	G	H	L	W
Template Known Secondary structure			G	G	G	G	G	G	T	T	S						T	T								G	G	G	G	T	T					.	.	.	.	.				S				S	S	S						T	T	T										S	S			S	S
Template Predicted Secondary structure																																				.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.						.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	K	F	E	I	E	M	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	S	R	I	L	L	K	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions