 |
| Job Description | Q9VX18 | | Confidence | 99.63% | Date | Tue Jan 22 11:47:38 GMT 2013 |
| Rank | 64 | Aligned Residues | 106 |
| % Identity | 25% | Template | c3gqiB_ |
| PDB info |
PDB header:transferase/transferase inhibitor | Chain: B: PDB Molecule:phospholipase c-gamma-1; |
PDBTitle: crystal structure of activated receptor tyrosine kinase in complex2 with substrates
|
| Resolution | 2.50 Å |
|
 |
|   |   |
831 | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | |
. | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | Q | F | T | S | S | I | E | K | V | K | D | Y | G | W | Y | W | G | P | L | S | S | E | A | A | E | K | V | L | S | S | E | P | . |
D | G | S | F | I | V | R | D | S | S | D | D | H | Y | I | F | S | L | S | F | K | L | N | N | C | V | R | H | V | R | I | E | Q | D | Q | G | T | F | S | F | G | S | Y | A | K | F |
| Query Conservation |   |
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |
|   |
|   |
|
|
|   |
|   |
|   |
|
|
|
|
|   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|   |
|   |
|   | . |   |   |
|   |
|
|
|
|
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   | . |   |   |
|
| Template Sequence |   |
S | E | P | V | P | Q | T | N | A | H | E | S | K | E | W | Y | H | A | S | L | T | R | A | Q | A | E | H | M | L | M | R | V | P | R | D | G | A | F | L | V | R | K | R | N | . |
E | P | N | S | Y | A | I | S | F | R | A | E | G | K | I | K | H | C | R | V | Q | Q | E | G | Q | T | V | M | L | G | N | . |
S | E | F |
| Template Known Secondary structure |   |
|
| B |
|
|
| S | S | G | G | G | G | S | S | S |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  | T |
|
| S | S | S |  |  |  |  |  |  |
| S | . | S | S | S |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | T | T | . |  |  |  |
| Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
| . |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
654 | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | |
. | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | |
. | 730 | . |
|   |
|   |   |
910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
K | S | Q | T | I | T | E | F | I | E | K | A | V | E | H | S | R | S | G | R | Y | L | F | F | L | H | R | R | P | E | H | G | P | M | R | V | Q | L | T | N | P | V | S | R | F | K |
| Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
| Alig confidence |   |
| . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  | . | . |
|
|   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|
|   |   |   |   |   | . | . |
|   |   |
|
|   |   |   |   |
| Template Sequence |   |
D | . |
. |
S | L | V | D | L | I | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | Y | E | K | H | P | L | Y | R | K | M | K | . |
. |
L | R | Y | P | I | N | E | E | A |
| Template Known Secondary structure |   |
S | . | . | S |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  | T | T | S |
| S | B | T | T | B |
| . | . |
|
|  |  |
|
|  |  |  |
| Template Predicted Secondary structure |   |
| . | . |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|  | . | . |  |
|
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
732 | |
|
. | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
740 | . | . | . | . | . | . | . | . | . | 750 | . | |
|
. | . | . | . | . | . | . | . | 760 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|