Job Description Q9VX18 Confidence 99.10% Date Tue Jan 22 11:47:38 GMT 2013 Rank 102 Aligned Residues 79 % Identity 23% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		839	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.		890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		K	V	K	D	Y	G	W	Y	W	G	P	L	S	S	E	A	A	E	K	V	L	S	S	E	P	D	G	S	F	I	V	R	D	S	S	D	D	H	Y	I	F	S	L	S	F	K	L	N	N	C	V	.	R	H	V	R	I	E	Q	D	Q	G	T	F	S	F	G	S	Y	A	K	F	K	S	Q	T	I	T	E	F
Query Conservation																																																					.
Alig confidence											.														.													.															.																			.		.	.
Template Conservation											.														.													.																																		.		.	.
Template Sequence		R	F	Y	K	H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	S	T	D	D	F	L	I	R	K	G	S	R	.	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	E	E	H	S	E	H	Y	T	C	S	N	K	H	.	F	.	.	E	D	I	D	E	V
Template Known Secondary structure		G	G	G	G	S	T	T			.														.	S	S									S	S	.	T	T										T	T											S	S					T	T			.		.	.	S	S
Template Predicted Secondary structure											.														.													.																																		.		.	.
Template SS confidence
		788	.	790	.	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.		810	.	.	.	.	.	.	.	.	.	820	.		.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.		.			.	.	.	.	860	.
		918	.	920	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	K	A	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	V	Y	V	R
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		862	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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