Job Description Q9VX18 Confidence 100.00% Date Tue Jan 22 11:47:38 GMT 2013 Rank 1 Aligned Residues 152 % Identity 34% Template c2izvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution Resolution 2.55 Å

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		833	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.			.	.	910
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		F	T	S	S	I	E	K	V	K	D	Y	G	W	Y	W	G	P	L	S	S	E	A	A	E	K	V	L	S	S	E	P	D	G	S	F	I	V	R	D	S	S	D	D	H	Y	I	F	S	L	S	F	K	L	N	N	C	V	R	H	V	R	I	E	Q	D	Q	G	T	F	S	F	G	S	Y	A	.	.	K	F	K
Query Conservation																																																																													.	.
Alig confidence																																																																													.	.
Template Conservation
Template Sequence		L	V	P	D	L	L	Q	I	N	N	N	P	C	Y	W	G	V	M	D	K	Y	A	A	E	A	L	L	E	G	K	P	E	G	T	F	L	L	R	D	S	A	Q	E	D	Y	L	F	S	V	S	F	R	R	Y	S	R	S	L	H	A	R	I	E	Q	W	N	H	N	F	S	F	D	A	H	D	P	C	V	F	H
Template Known Secondary structure				T	T								T	T															T	T			T	T								S	S	T	T		S								T	T											T	T				S		T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		911	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	T	I	T	E	F	I	E	K	A	V	E	H	S	R	S	G	R	Y	L	F	F	L	H	R	R	P	E	H	G	P	M	R	V	Q	L	T	N	P	V	S	R	F	K	H	V	Q	S	L	Q	H	M	C	R	F	V	I	L	K	A	V	I	R	K	D	L	I	Q	T	L	P	L	P	R	R	L	L	D	Y
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.														.																			.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.														.																			.
Template Sequence		S	P	D	I	T	G	L	L	E	H	Y	K	D	P	S	A	C	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	F	E	P	L	L	S	T	P	L	I	R	.	T	F	P	F	S	L	Q	H	I	C	R	T	V	I	C	N	C	T	.	T	Y	D	G	I	D	A	L	P	I	P	S	S	M	K	L	Y
Template Known Secondary structure		B	S	S								T			G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S										.		S																S	.							T	S	S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.														.																			.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370														.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		991	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	Y	K	H	C	Y	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	E	Y	H	Y	K	S	K
Template Known Secondary structure			T	S	S
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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