Job Description Q9VX18 Confidence 100.00% Date Tue Jan 22 11:47:38 GMT 2013 Rank 2 Aligned Residues 142 % Identity 35% Template c2c9wA_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:suppressor of cytokine signaling 2; PDBTitle: crystal structure of socs-2 in complex with elongin-b and2 elongin-c at 1.9a resolution Resolution 1.9 Å

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		833	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	S	S	I	E	K	V	K	D	Y	G	W	Y	W	G	P	L	S	S	E	A	A	E	K	V	L	S	S	E	P	D	G	S	F	I	V	R	D	S	S	D	D	H	Y	I	F	S	L	S	F	K	L	N	N	C	V	R	H	V	R	I	E	Q	D	Q	G	T	F	S	F	G	S	Y	A	K	F	K	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	K	A	L	R	E	L	G	Q	T	G	W	Y	W	G	S	M	T	V	N	E	A	K	E	K	L	K	E	A	P	E	G	T	F	L	I	R	D	S	S	H	S	D	Y	L	L	T	I	S	V	K	T	S	A	G	P	T	N	L	R	I	E	Y	Q	D	G	K	F	R	L	D	S	I	I	C	V	K	S	K
Template Known Secondary structure												T	S		B		T	T											T	T	S		T	T									S	T	T		S								T	T											T	T						T	T	T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
							913	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	T	I	T	E	F	I	E	K	A	V	E	H	S	R	S	G	R	Y	L	F	F	L	H	R	R	P	E	H	G	P	M	R	V	Q	L	T	N	P	V	S	R	F	K	H	V	Q	S	L	Q	H	M	C	R	F	V	I	L	K	A	V	I	R	K	D	L	I	Q	T	L	P	L	P	R	R	L
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.																				.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.																				.	.	.
Template Sequence		L	K	Q	F	D	S	V	V	H	L	I	D	Y	Y	V	Q	M	C	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	Y	L	T	K	P	L	.	.	Y	T	S	A	P	S	L	Q	H	L	C	R	L	T	I	N	K	C	T	.	.	.	G	A	I	W	G	L	P	L	P	T	R	L
Template Known Secondary structure					B	S													T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							B		.	.		S	S																	.	.	.	S		G	G	G	S	S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.																				.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																		.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.
		988	.	990	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	Y	L	N	Y	K	H	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	Y	L	E	E	Y	K	F
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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