Return to main results Retrieve Phyre Job Id

Job DescriptionQ9VX18
Confidence93.95%DateTue Jan 22 11:47:38 GMT 2013
Rank116Aligned Residues85
% Identity31%Templatec1yo8A_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:thrombospondin-2; PDBTitle: structure of the c-terminal domain of human thrombospondin-2
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   865....870........ .880.........890.........900. ........910..... ....920........
Predicted Secondary structure 








.






....







........


...
Query SS confidence 













.






















. . . .













. . . . . . . .












. . .
Query Sequence  GSFIVRDSSDDHYI. FSLSFKLNNCVRHVRIEQDQGTF. . . . SFGSYAKFKSQTIT. . . . . . . . EFIEKAVEHSRSG. . .
Query Conservation 








     .



 
    
 
 


 
 
 
....



  
    
  ........ 
       
   ...
Alig confidence 













.






















....













........












...
Template Conservation 

  
      
  

              
                   
                    
        
Template Sequence  GTFYVNTDRDDDYAGFVFGYQSSSRFYVVXWKQVTQTYWEDQPTRAYGYSGVSLKVVNSTTGTGEHLRNALWHTGNTPGQ
Template Known Secondary structure 

SS


TTSS

S

SSS


S
SS
TTSSS
BTTT
Template Predicted Secondary structure 











































Template SS confidence 















































































   1012.......1020.........1030.........1040.........1050.........1060.........1070.........1080.........1090.
 
   929930.........940.........
Predicted Secondary structure  .................








Query SS confidence  . . . . . . . . . . . . . . . . .




















Query Sequence  . . . . . . . . . . . . . . . . . RYLFFLHRRPEHGPMRVQLTN
Query Conservation  .................
 

   

         
  
Alig confidence  .................




















Template Conservation             

     
                   
Template Sequence  VRTLWHDPRNIGWKDYTAYRWHLTHRPKTGYIRVLVHE
Template Known Secondary structure 
TT




TT

TTTT
Template Predicted Secondary structure 
















Template SS confidence 





































   1092.......1100.........1110.........1120.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions