Job Description Q9W4A9 Confidence 100.00% Date Wed Feb 13 11:40:50 GMT 2013 Rank 5 Aligned Residues 189 % Identity 30% Template c3fk2B_ PDB info PDB header:signaling protein, hydrolase activator Chain: B: PDB Molecule:glucocorticoid receptor dna-binding factor 1; PDBTitle: crystal structure of the rhogap domain of human2 glucocorticoid receptor dna-binding factor 1 Resolution 2.80 Å

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		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	V	F	G	T	D	L	T	T	M	V	Q	L	E	P	H	H	Q	I	P	F	V	V	R	R	C	V	E	E	V	E	A	R	G	M	L	Q	E	G	I	Y	R	V	S	G	F	A	D	E	I	E	A	L	K	L	A	L	D	R	E	G	E	K	T	D	M	S	E	T	A	Y	G	N	V	N	V	I	A	G
Query Conservation
Alig confidence																		.	.																																																						.	.
Template Conservation																		.	.																																																						.	.
Template Sequence		S	N	Y	F	G	V	P	L	T	T	V	V	T	P	E	K	.	.	P	I	P	I	F	I	E	R	C	I	E	Y	I	E	A	T	G	L	S	T	E	G	I	Y	R	V	S	G	N	K	S	E	M	E	S	L	Q	R	Q	F	D	Q	D	H	N	L	D	L	A	E	K	D	F	.	.	T	V	N	T	V	A	G
Template Known Secondary structure			S	S	T	T	S		G	G	G	G			S	S	S	.	.		S																T	T	S	T	T	T	T	T	S																		T	T			S	G	G	G	T		.	.
Template Predicted Secondary structure																		.	.																																																						.	.
Template SS confidence
		1244	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.			1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.			.	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	K	L	Y	L	R	L	L	P	V	P	L	I	T	F	Q	A	Y	P	S	F	M	A	A	G	R	T	G	K	Q	A	E	Q	R	Q	L	M	A	E	A	V	R	R	L	P	P	A	H	H	S	C	L	Q	Y	M	L	E	H	L	K	R	V	A	S	H	Y	A	V	N	K	M	N	E	H	N	L	A	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	K	S	F	F	S	E	L	P	D	P	L	V	P	Y	N	M	Q	I	D	L	V	E	A	H	K	I	N	D	R	E	Q	K	L	H	A	L	K	E	V	L	K	K	F	P	K	E	N	H	E	V	F	K	Y	V	I	S	H	L	N	K	V	S	H	N	N	K	V	N	L	M	T	S	E	N	L	S	I	C
Template Known Secondary structure										S	S	S		S	S												T	T			S														T	S																				T	T
Template Predicted Secondary structure
Template SS confidence
		1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.
		459	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		F	A	P	T	L	I	A	T	P	.	Q	H	M	T	N	L	T	E	E	I	F	M	L	S	S	L	I	T	H	C	K	T	I	F
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		F	W	P	T	L	M	R	P	D	M	D	A	L	T	A	T	R	T	Y	Q	T	I	I	E	L	F	I	Q	Q	C	P	F	F	F
Template Known Secondary structure																														T
Template Predicted Secondary structure
Template SS confidence
		1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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