 |
| Job Description | Q9W4A9 | | Confidence | 31.08% | Date | Wed Feb 13 11:40:50 GMT 2013 |
| Rank | 168 | Aligned Residues | 36 |
| % Identity | 19% | Template | c2zetD_ |
| PDB info |
PDB header:signaling protein | Chain: D: PDB Molecule:melanophilin; |
PDBTitle: crystal structure of the small gtpase rab27b complexed with2 the slp homology domain of slac2-a/melanophilin
|
| Resolution | 3.00 Å |
|
|   |   |
255 | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
C | E | F | C | A | N | F | L | W | G | F | T | A | Q | G | V | K | C | E | A | C | G | F | V | A | H | S | K | C | S | E | L | V | P | P | K |
| Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
| Template Sequence |   |
C | A | R | C | L | Q | P | Y | R | L | L | L | N | S | R | R | Q | C | L | E | C | S | L | F | V | C | K | S | C | S | H | A | H | P | E | E |
| Template Known Secondary structure |   |
| S | S | S |
|
| B | G | G | G |
| S | S |
|
|  |  |
| T | T | T |
|
|  |  |
| G | G | G |  |  |
|
| S | S | S |
| Template Predicted Secondary structure |   |
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|