Job Description Q9VIF7 Confidence 92.74% Date Tue Jan 22 11:36:07 GMT 2013 Rank 497 Aligned Residues 280 % Identity 10% Template c4hpqC_ PDB info PDB header:protein transport Chain: C: PDB Molecule:atg17; PDBTitle: crystal structure of the atg17-atg31-atg29 complex Resolution 3.06 Å

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		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	Q	A	E	L	D	R	R	R	K	I	M	E	D	Q	Q	R	K	E	R	E	E	R	E	R	K	E	R	E	E	A	D	K	R	E	K	A	R	L	E	A	E	R	K	Q	Q	E	E	L	E	R	Q	L	Q	R	Q	R	E	I	E	M	E	K	E	E	Q	R	K	R	E	L	E	A	K	E	A	A	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	V	N	D	M	K	F	W	Q	N	E	I	T	K	M	M	N	K	L	D	N	I	T	N	E	I	D	Q	Q	H	N	S	K	L	G	D	F	I	S	R	D	S	S	H	I	L	D	S	K	L	N	E	I	P	T	I	R	K	Q	V	E	N	I	T	R	Q	Y	Q	T	M	L	A	K	V	Q	S	Q	L	V
Template Known Secondary structure																							T	S					S	S	S				T	T	T	T	S	S			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	E	K	Q	R	Q	Q	E	W	E	Q	A	R	I	A	E	M	N	A	Q	K	E	R	E	Q	E	R	V	L	K	Q	K	A	H	N	T	Q	L	N	V	E	L	S	T	L	N	E	K	I	K	E	L	S	Q	R	I	C	D	T	R	A	G	V	T	N	V	K	T	V	I	D	G	M	R	T	Q	R	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	R	M	K	G	L	R	D	E	F	S	E	E	F	T	N	E	A	D	Q	L	E	Q	E	L	A	D	F	L	K	S	F	T	D	H	F	D	K	C	S	A	L	S	S	R	S	V	S	P	E	D	A	Q	N	L	F	E	I	V	E	R	D	D	K	D	L	A	A	I	N	S	L	L	Q	D	A	A	I	D
Template Known Secondary structure																																												T	T	T	T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.				.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		S	M	S	E	M	S	Q	L	K	A	R	I	K	E	Q	N	A	K	L	L	Q	L	T	Q	E	R	A	K	W	E	A	K	S	K	A	S	G	A	A	.	.	.	L	G	G	E	N	A	Q	Q	E	Q	L	N	A	A	F	A	H	K	Q	L	I	I	N	Q	I	K	D	K	V	E	N	I	S	K	E	I	E	S
Query Conservation																																									.	.	.
Alig confidence																																									.	.	.
Template Conservation
Template Sequence		V	A	S	F	V	R	K	V	N	M	L	L	D	E	R	D	A	D	K	A	K	M	Q	A	T	L	S	K	L	L	T	E	L	R	K	H	E	E	Y	I	S	V	F	E	G	I	S	A	L	I	Q	K	F	K	A	S	C	L	E	D	I	R	Q	T	R	N	L	L	D	F	Y	A	N	F	E	R	S	Y	H	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	E	D	I	N	T	N	D	V	Q	M	S	E	L	K	A	E	L	S	A	L	I	T	K	C	E	D	L	Y	K	E	Y	D	V	Q	R	T	S	V	L	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	K	E	V	K	R	R	K	E	T	A	A	K	L	S	Q	I	L	K	S	C	E	T	Q	L	E	Q	I	N	T	A	D	L	R	E	R	Q	M	F	L	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions