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Job DescriptionQ9VIF7
Confidence98.09%DateTue Jan 22 11:36:07 GMT 2013
Rank248Aligned Residues139
% Identity31%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20......... 30.........40.... .....50.........60.........70.........80
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Query Sequence  VTPRERLKYQEQFRALQPQA. GFVTGAQAKGFFLQS. . . . . . . . QLPPLILGQIWALADTDSDGKMNINEFSIACKLINL
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Template Sequence  TTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKLGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQI
Template Known Secondary structure  S

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   368.370.........380.........390.........400.........410.........420.........430.........440.......
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  KLRGMDVPKVLPPSLLSSLTGDVPSMTPRGSTSSLSPLDPLKGIVPAVAPVVPVVAPPVAVATVISPPGVSVPSGPTPPT
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Template Sequence  LFS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T
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   450..
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  SNPPSRHTSISERAPSIESVNQGEWAVQAAQKRKYTQVFNANDRTRSGYLTGSQARGVLVQSKLPQVTLAQIWTLSDIDG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNK
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   453......460.........470.........480.........490.........500.
 
   241........250......
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Query Sequence  DGRLNCDEFILAMFLC
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Template Sequence  DNMIDFDEFVSMMHKI
Template Known Secondary structure  SSS
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   502.......510.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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