Job Description Q9VIF7 Confidence 97.27% Date Tue Jan 22 11:36:07 GMT 2013 Rank 346 Aligned Residues 63 % Identity 16% Template c3lcpC_ PDB info PDB header:protein binding Chain: C: PDB Molecule:multiple coagulation factor deficiency protein 2; PDBTitle: crystal structure of the carbohydrate recognition domain of lman1 in2 complex with mcfd2 Resolution 2.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																			.																.	.	.
Query SS confidence																			.																.	.	.
Query Sequence		V	T	P	R	E	R	L	K	Y	Q	E	Q	F	R	A	L	Q	.	P	Q	A	G	F	V	T	G	A	Q	A	K	G	F	F	.	.	.	L	Q	S	Q	L	P	P	L	I	L	G	Q	I	W	A	L	A	D	T	D	S	D	G	K	M	N	I	N	E	F	S	I	A
Query Conservation																			.																.	.	.
Alig confidence											.	.							.																.	.	.
Template Conservation											.	.
Template Sequence		M	S	P	Q	E	L	Q	L	H	.	.	Y	F	K	M	H	D	Y	D	G	N	N	L	L	D	G	L	E	L	S	T	A	I	T	P	L	M	S	E	D	E	L	I	N	I	I	D	G	V	L	R	D	D	D	K	N	N	D	G	Y	I	D	Y	A	E	F	A	K	S
Template Known Secondary structure											.	.				T	T		T	T		S	S		B																															T	T		S	S		B
Template Predicted Secondary structure											.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions