Job Description Q9VIF7 Confidence 93.96% Date Tue Jan 22 11:36:07 GMT 2013 Rank 486 Aligned Residues 144 % Identity 15% Template c2ocyB_ PDB info PDB header:endocytosis/exocytosis Chain: B: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: complex of the guanine exchange factor sec2p and the rab2 gtpase sec4p Resolution 3.30 Å

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		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.				.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		T	Q	L	N	V	E	L	S	T	L	N	E	K	I	K	E	L	S	Q	R	I	C	D	T	R	A	G	V	T	N	V	K	T	V	I	D	G	M	R	T	Q	R	D	T	S	M	S	E	M	S	Q	L	K	A	.	.	.	R	I	K	E	Q	N	A	K	L	L	Q	L	T	Q	E	R	A	K	W	E	A	K	S
Query Conservation																																																								.	.	.
Alig confidence																																																								.	.	.
Template Conservation
Template Sequence		X	A	L	S	T	Q	L	I	E	S	V	D	K	Q	S	H	L	E	E	Q	L	N	K	S	L	K	T	I	A	S	Q	K	A	A	I	E	N	Y	N	Q	L	K	E	D	Y	N	T	L	K	R	E	L	S	D	R	D	D	E	V	K	R	L	R	E	D	I	A	K	E	N	E	L	R	T	K	A	E	E	E	A
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		532	.	.	.	.	.	.	.	540	.	.	.	.		.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		K	A	S	G	A	A	L	G	G	E	N	A	Q	.	Q	E	Q	L	N	A	A	F	A	H	K	Q	L	I	I	N	Q	I	K	D	K	V	E	N	I	S	K	E	I	E	S	K	K	E	D	I	N	T	N	D	V	Q	M	S	E	L	K	A	E	L	S	A	L	I
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		D	K	L	N	K	E	V	E	D	L	T	A	S	L	F	D	E	A	N	N	X	V	A	D	A	R	K	E	K	Y	A	I	E	I	L	N	K	R	L	T	E	Q	L	R	E	K	D	T	L	L	D	T	L	T	L	Q	L	K	N	L	K	K	V	X	H	S	L	D
Template Known Secondary structure																																																																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions