Job Description Q9VIF7 Confidence 96.54% Date Tue Jan 22 11:36:07 GMT 2013 Rank 428 Aligned Residues 128 % Identity 9% Template c2d3eD_ PDB info PDB header:contractile protein Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1 PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin Resolution 2.60 Å

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		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	E	R	E	Q	E	R	V	L	K	Q	K	A	H	N	T	Q	L	N	V	E	L	S	T	L	N	E	K	I	K	E	L	S	Q	R	I	C	D	T	R	A	G	V	T	N	V	K	T	V	I	D	G	M	R	T	Q	R	D	T	S	M	S	E	M	S	Q	L	K	A	R	I	K	E	Q	N	A	K	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	E	E	L	L	S	K	N	Y	H	L	E	N	E	V	A	R	L	K	K	L	L	E	R	A	E	E	R	A	E	L	S	E	G	K	C	A	E	L	E	E	E	L	K	T	V	T	N	N	L	K	S	L	E	A	Q	A	E	K	Y	S	Q	K	E	D	K	Y	E	E	E	I	K	V	L	S	D	K	L	K
Template Known Secondary structure																																		T	T	S													T	T	T	T						T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	T	Q	E	R	A	K	W	E	A	K	S	K	A	S	G	A	A	L	G	G	E	N	A	Q	Q	E	Q	L	N	A	A	F	A	H	K	Q	L	I	I	N	Q	I	K	D	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	E	T	R	A	E	F	A	E	R	S	V	T	K	L	E	K	S	I	D	D	L	E	D	E	L	Y	A	Q	K	L	K	Y	K	A	I	S	E	E	L	D	H	A	L	N	D	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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