Return to main results Retrieve Phyre Job Id

Job DescriptionQ9VIF7
Confidence99.94%DateTue Jan 22 11:36:07 GMT 2013
Rank4Aligned Residues127
% Identity38%Templatec1griA_
PDB info PDB header:signal transduction adaptorChain: A: PDB Molecule:growth factor bound protein 2; PDBTitle: grb2
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   946...950.........960.........970.........980.........990.........1000...
Predicted Secondary structure 













































......................
Query SS confidence 

























































. . . . . . . . . . . . . . . . . . . . . .
Query Sequence  AQVIAPYEATSTEQLSLTRGQLIMIRKKTDSGWWEGELQAKGRRRQIGWFPATYVKVL. . . . . . . . . . . . . . . . . . . . . .
Query Conservation          
     

   
  
 
      

  
           
  
   
   ......................
Alig confidence 
























.....








.....













......................
Template Conservation   





      



  

 
 
.....  
  
   .....   
  
   
                         
Template Sequence  AIAKYDFKATADDELSFKRGDILKV. . . . . QNWYKAELN. . . . . GKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQR
Template Known Secondary structure 
S
B


SSS


B
TT

.....

SS.....S
GGG



SSB
TT

T
S
Template Predicted Secondary structure 

















.....


.....





























Template SS confidence 















































































   3......10.........20....... ..30...... ...40.........50.........60.........70..
 
   1004.....1010.........1020.......
Predicted Secondary structure  ........................................................























Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .























Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QGGRNSGRNTPVSGSRIEMTEQIL
Query Conservation  ........................................................                        
Alig confidence  ........................................................























Template Conservation                     
      
                     
                               
Template Sequence  HDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQP
Template Known Secondary structure  STT

SSSTT
TT
SSS
SSS
SSS
SSSSTT



B







Template Predicted Secondary structure 





































































Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   1028.1030.........1040.........1050.........1060.........1070.........1080..
Predicted Secondary structure 

























Query SS confidence 






















































Query Sequence  DKVIALYPYKAQNDDELSFDKDDIISVLGRDEPEWWRGELNGLSGLFPSNYVGPF
Query Conservation      


 
 
   




  

 
 
  
 
 


 
   
  
 

 


 
 
Alig confidence 






















































Template Conservation      


 
 
    



  

 
 

 
   


 
   
  
 





  
Template Sequence  TYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPV
Template Known Secondary structure 
SS



SSTTB



TT


SSS
SS
GGG
Template Predicted Secondary structure 






















Template SS confidence 






















































   159160.........170.........180.........190.........200.........210...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions