Job Description Q9VIF7 Confidence 98.01% Date Tue Jan 22 11:36:07 GMT 2013 Rank 257 Aligned Residues 283 % Identity 11% Template c1c1gA_ PDB info PDB header:contractile protein Chain: A: PDB Molecule:tropomyosin; PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form Resolution 7.00 Å

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	Y	V	K	G	Q	A	E	L	D	R	R	R	K	I	M	E	D	Q	Q	R	K	E	R	E	E	R	E	R	K	E	R	E	E	A	D	K	R	E	K	A	R	L	E	A	E	R	K	Q	Q	E	E	L	E	R	Q	L	Q	R	Q	R	E	I	E	M	E	K	E	E	Q	R	K	R	E	L	E	A	K	E
Query Conservation
Alig confidence																																		.
Template Conservation																																		.
Template Sequence		D	A	I	K	K	K	M	Q	M	L	K	L	D	K	E	N	A	L	D	R	A	D	E	A	E	A	D	K	K	A	A	E	.	D	R	S	K	Q	L	E	D	E	L	V	S	L	Q	K	K	L	K	A	T	E	D	E	L	D	K	Y	S	E	A	L	K	D	A	Q	E	K	L	E	L	A	E	K	K	A	T	D
Template Known Secondary structure																																		.
Template Predicted Secondary structure																																		.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	K	E	L	E	K	Q	R	Q	Q	E	W	E	Q	A	R	I	A	E	M	N	A	Q	K	E	R	E	Q	E	R	V	L	K	Q	K	A	H	N	T	Q	L	N	V	E	L	S	T	L	N	E	K	I	K	E	L	S	Q	R	I	C	D	T	R	A	G	V	T	N	V	K	T	V	I	D	G	M	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	A	D	V	A	S	L	N	R	R	I	Q	L	F	E	E	E	L	D	R	A	Q	E	R	L	A	T	A	L	Q	K	L	E	E	A	E	K	A	A	D	E	S	E	R	G	M	K	V	I	E	S	R	A	Q	K	D	E	E	K	M	E	I	Q	E	I	Q	L	K	E	A	K	H	I	A	E	D	A	D	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	D	T	S	M	S	E	M	S	Q	L	K	A	R	I	K	E	Q	N	A	K	L	L	Q	L	T	Q	E	R	A	K	W	E	A	K	S	K	A	S	G	A	A	L	G	G	E	N	A	Q	Q	E	Q	L	N	A	A	F	A	H	K	Q	L	I	I	N	Q	I	K	D	K	V	E	N	I	S	K	E	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	E	E	V	A	R	K	L	V	I	I	E	S	D	L	E	R	A	E	E	R	A	E	L	S	E	G	K	C	A	E	L	E	E	E	I	K	T	V	T	N	N	L	K	S	L	E	A	Q	A	E	K	Y	S	Q	K	E	D	K	Y	E	E	E	I	K	V	L	S	D	K	L	K	E	A	E	T	R	A	E
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	K	E	D	I	N	T	N	D	V	Q	M	S	E	L	K	A	E	L	S	A	L	I	T	K	C	E	D	L	Y	K	E	Y	D	V	Q	R	T	S	V	L	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	E	R	S	V	T	K	L	E	K	S	I	D	D	L	E	D	E	L	Y	A	Q	K	L	K	Y	K	A	I	S	E	E	L	D	H	A	L	N	D	M	T	S	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions