Phyre 2 alignment of Q9VIF7 with c3uatA_

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Job Description | Q9VIF7
Confidence | 98.98% | Date | Tue Jan 22 11:36:07 GMT 2013
Rank | 226 | Aligned Residues | 52
% Identity | 31% | Template | c3uatA_
PDB info | PDB header:peptide binding protein | Chain: A: PDB Molecule:disks large homolog 1; | PDBTitle: guanylate kinase domains of the maguk family scaffold proteins as2 specific phospho-protein binding modules
Resolution | 2.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1028 | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . |  |  |  |  |  | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . |  |  |  |  |  |  | . | . | 1070 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | K | V | I | A | L | Y | P | Y | K | A | Q | N | D | D | . | . | . | . | . | E | L | S | F | D | K | D | D | I | I | S | V | L | G | R | D | E | P | E | W | W | R | G | E | L | . | . | . | . | . | . | N | G | L | S | G | L | F | P | S | N | Y | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | Y | V | R | A | L | F | D | Y | D | K | T | K | D | S | G | L | P | S | Q | G | L | N | F | K | F | G | D | I | L | H | V | I | N | A | S | D | D | E | W | W | Q | A | R | Q | V | T | P | D | G | E | S | D | E | V | G | V | I | P | S | K | R | R
Template Known Secondary structure |  |  |  |  |  |  |  | S |  |  |  | T | T | T |  |  |  |  | S | S |  | B |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  | S | S |  | B |  | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 583 | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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