Phyre 2 alignment of Q9VIF7 with c3npfB_

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Job Description | Q9VIF7
Confidence | 95.05% | Date | Tue Jan 22 11:36:07 GMT 2013
Rank | 473 | Aligned Residues | 36
% Identity | 14% | Template | c3npfB_
PDB info | PDB header:hydrolase | Chain: B: PDB Molecule:putative dipeptidyl-peptidase vi; | PDBTitle: crystal structure of a putative dipeptidyl-peptidase vi (bacova_00612)2 from bacteroides ovatus at 1.72 a resolution
Resolution | 1.72 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1045 | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . |  | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | F | D | K | D | D | I | I | S | V | L | G | R | D | E | P | E | W | W | R | G | E | L | . | N | G | L | S | G | L | F | P | S | N | Y | V | G | P | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | A | L | L | G | X | P | V | K | V | L | Q | Y | . | . | N | G | W | Y | E | I | Q | T | P | D | D | Y | T | G | W | V | H | R | X | V | I | T | P | X
Template Known Secondary structure |  |  |  |  | T | T |  |  |  |  |  |  |  |  | . | . | S | S |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | G | G | G |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 56 | . | . | . | 60 | . | . | . | . | . | . | . | . |  |  | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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