Job Description Q95RW2 Confidence 99.47% Date Tue Jan 22 11:47:27 GMT 2013 Rank 284 Aligned Residues 55 % Identity 20% Template c3rebD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: hiv-1 nef protein in complex with engineered hck-sh3 domain Resolution 3.45 Å

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		V	K	Q	S	R	V	P	N	A	Y	D	K	T	A	L	K	L	E	I	G	D	I	I	K	V	T	K	T	N	I	N	G	Q	W	E	G	E	.	L	N	G	K	N	G	H	F	P	F	T	H	V	E	F	V	D	D
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		V	V	A	L	Y	D	Y	V	S	W	S	P	D	D	L	S	F	Q	K	G	D	Q	M	V	V	L	E	E	S	G	E	W	W	K	A	R	S	L	A	T	R	K	E	G	Y	I	P	S	N	Y	V	A	R	V	D	S
Template Known Secondary structure					S	S		B			S	S	T	T	B			B		T	T									S	S	S							T	T	T								G	G	G
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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