Job Description Q95RW2 Confidence 98.07% Date Tue Jan 22 11:47:27 GMT 2013 Rank 309 Aligned Residues 119 % Identity 13% Template c3pvlA_ PDB info PDB header:motor protein/protein transport Chain: A: PDB Molecule:myosin viia isoform 1; PDBTitle: structure of myosin viia myth4-ferm-sh3 in complex with the cen1 of2 sans Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	M	N	E	R	E	R	G	V	F	L	V	R	D	S	N	S	I	A	G	D	Y	V	L	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	I	V	Y	R	I	G	D	Q	S	F	D	N	L	P	K	L	L	T	F	Y	T	L	H	Y	L	D	T	T	P
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		V	I	V	A	V	N	W	T	G	V	Y	F	V	D	E	Q	E	Q	V	L	L	E	L	S	F	P	E	I	M	A	V	S	S	S	R	G	T	K	M	M	A	P	S	F	T	L	A	T	I	K	G	D	E	Y	T	F	T	S	S	N	A	E	D	I	R	D	L	V	V	T	F	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T							T	T									G	G	G											S	S	S									T	T	S								T	T												.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		1489	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.								.	.
Query SS confidence																																											.	.	.	.								.	.
Query Sequence		L	K	R	P	A	C	R	R	V	E	K	V	I	G	K	F	D	F	V	G	S	D	Q	D	D	L	P	F	Q	R	G	E	V	L	T	I	V	R	K	D	E	.	.	.	.	D	Q	W	W	T	A	R	.	.	N	S	S	G	K	I	G	Q	I	P	V	P	Y	I	Q	Q	Y	D	D	Y	M	D	E	D	A	I
Query Conservation																																											.	.	.	.								.	.
Alig confidence		.																		.	.																						.	.	.	.								.	.
Template Conservation		.																		.	.
Template Sequence		.	L	E	G	L	R	K	R	S	K	Y	V	V	A	L	Q	D	N	.	.	P	N	S	G	F	L	S	F	A	K	G	D	L	I	I	L	D	H	D	T	G	E	Q	V	M	N	S	G	W	A	N	G	I	N	E	R	T	K	Q	R	G	D	F	P	T	D	C	V	Y	V	M	P	T	V	T	L	P	P	R	E
Template Known Secondary structure		.														S	S			.	.					B					T	T						S	S									S	S							T	T	T								G	G	G							S	S
Template Predicted Secondary structure		.																		.	.
Template SS confidence
			1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.			.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions