Job Description Q95RW2 Confidence 99.36% Date Tue Jan 22 11:47:27 GMT 2013 Rank 294 Aligned Residues 116 % Identity 17% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	S	W	Y	F	G	P	M	S	R	Q	D	A	T	E	V	L	M	N	E	R	E	R	G	V	F	L	V	R	D	S	N	S	I	A	G	D	Y	V	L	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	I	V	Y	R	I	G	D	Q	S	F	D	N	L	P	K	L	L	T	F	Y	T	L
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.														.	.											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.														.	.											.
Template Sequence		H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	.	S	T	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	E	E	H	S	E	H	Y	T	C	S	N	K	H	F	E	D	I	D	E	V	I	S	V	Y	V	R
Template Known Secondary structure		S	T	T			.														.	.	S	S									.	S	S	T	T										T	T											S	S					T	T				S	S								T
Template Predicted Secondary structure							.														.	.											.
Template SS confidence
		792	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.			810	.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.
		75	.	.	.																.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query Sequence		H	Y	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	P	L	K	R	P	A	C	R	R	V	E	K	V	I	G	K	F	D	F	V	G	S	D	Q	D	D	.	.	L	P	F	Q	R	G	E	V	L	T	I	V	R	K	D	E	D	Q	W	W	T	A	R
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		P	I	L	R	N	L	K	S	I	K	A	H	A	K	Y	F	N	S	P	E	D	A	E	K	L	L	S	S	F	D	G	S	K	V	V	Y	A	F	Y	F	S	R	K	Y	P	G	K	L	T	F	A	Y	N	N	G	S	I	L	E	E	Y	I	G	V	S	D	M	L	T	Y	N	N
Template Known Secondary structure													S	T	T	B		S		T	T	T	S						T			S	S	S									S	S	S	T	T								S	S	S									S	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		868	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions