Job Description Q95RW2 Confidence 98.50% Date Tue Jan 22 11:47:27 GMT 2013 Rank 306 Aligned Residues 114 % Identity 21% Template c2xkxB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain Resolution 22.9 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	S	R	Q	D	A	T	E	V	L	M	N	E	R	E	R	G	V	F	L	V	R	D	S	N	S	I	A	G	D	Y	V	L	C	D	Q	I	V	Y	R	I	G	D	Q	S	F	D	N	L	P	K	L	L	T	F	Y	T	L	H	Y	L	D	T	T	P	L	K	R	P	A	C	R	R	V	E	K	V	I	G
Query Conservation
Alig confidence																									.	.	.							.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.							.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	S	H	E	Q	A	A	I	A	L	K	N	A	G	Q	T	V	T	I	I	A	Q	.	.	.	Y	K	P	E	E	Y	.	.	.	.	.	.	.	.	.	.	S	R	F	E	A	K	I	H	D	L	R	E	Q	L	M	N	S	S	L	G	S	G	T	A	S	L	R	S	N	P	K	R	G	F	Y	I	R	A
Template Known Secondary structure		T													T		S	S							.	.	.							.	.	.	.	.	.	.	.	.	.		T	B	T	T	T	B							S					S			T	T	T	T					S	S	S	S	S
Template Predicted Secondary structure																									.	.	.							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.				.	390	.	.	.	.											.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		96	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure												.	.	.	.	.																										.	.	.	.	.
Query SS confidence												.	.	.	.	.																										.	.	.	.	.
Query Sequence		K	F	D	F	V	G	S	D	Q	D	.	.	.	.	.	D	L	P	F	Q	R	G	E	V	L	T	I	V	R	K	D	E	D	Q	W	W	T	A	R	N	.	.	.	.	.	S	S	G	K	I	G	Q	I	P	V	P	Y
Query Conservation												.	.	.	.	.																										.	.	.	.	.
Alig confidence												.	.	.	.	.																										.	.	.	.	.
Template Conservation
Template Sequence		L	F	D	Y	D	K	T	K	D	C	G	F	L	S	Q	A	L	S	F	R	F	G	D	V	L	H	V	I	D	A	G	D	E	E	W	W	Q	A	R	R	V	H	S	D	S	E	T	D	D	I	G	F	I	P	S	K	R
Template Known Secondary structure		S	S		B						S				S	S	B			B		T	T										S	S	S									S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions