Job Description P00528 Confidence 100.00% Date Tue Jan 22 11:25:29 GMT 2013 Rank 126 Aligned Residues 233 % Identity 26% Template c4g3dE_ PDB info PDB header:transferase Chain: E: PDB Molecule:nf-kappa-beta-inducing kinase; PDBTitle: crystal structure of human nf-kappab inducing kinase (nik) Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		E	I	P	R	S	E	I	Q	L	L	R	K	L	G	R	G	N	F	G	E	V	F	Y	G	K	W	R	N	S	.	I	D	V	A	V	K	T	L	R	E	G	T	M	S	T	A	A	F	L	Q	E	A	A	I	M	K	K	F	R	H	N	R	L	V	A	L	Y	A	V	C	S	Q	E	E	P	I	Y	I	V	Q
Query Conservation																															.
Alig confidence																															.																.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		D	Y	E	Y	R	E	E	V	H	W	A	T	H	G	R	G	S	F	G	E	V	H	R	M	E	D	K	Q	T	G	F	Q	C	A	V	K	K	V	R	L	E	V	F	R	A	.	.	.	.	E	E	L	M	A	C	A	G	L	T	S	P	R	I	V	P	L	Y	G	A	V	R	E	G	P	W	V	N	I	F	M
Template Known Secondary structure		T	T	B			B	T	T	T							S	S	S	S								T	T	T											T	T	T			T	.	.	.	.					T	T	T	T				T	T	B										T	T
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.					.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.		.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		E	Y	M	S	K	G	S	L	L	D	F	L	R	E	G	D	G	R	Y	L	H	F	E	D	L	I	Y	I	A	T	Q	V	A	S	G	M	E	Y	L	E	S	K	Q	L	I	H	R	D	L	A	A	R	N	V	L	I	G	E	N	.	N	V	A	K	I	C	D	F	G	L	A	R	V	I	A	D	D	E	Y	C
Query Conservation																																																													.
Alig confidence																	.	.																																											.																				.
Template Conservation																	.	.																																																															.
Template Sequence		E	L	L	E	G	G	S	L	G	Q	L	V	K	E	Q	.	.	G	C	L	P	E	D	R	A	L	Y	Y	L	G	Q	A	L	E	G	L	E	Y	L	H	S	R	R	I	L	H	G	D	V	K	A	D	N	V	L	L	S	S	D	G	S	H	A	A	L	C	D	F	G	H	A	V	C	L	Q	P	G	T	T	.
Template Known Secondary structure					T	T		B								S	.	.	S	S																							T	T								G	G	G					S	S	S									T	T										.
Template Predicted Secondary structure																	.	.																																																															.
Template SS confidence
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.			.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	Q	G	S	R	F	P	V	K	W	T	A	P	E	A	I	I	Y	G	K	F	S	I	K	S	D	V	W	S	Y	G	I	L	L	M	E	L	F	T	Y	G	Q	V	P	Y	P	G	M	H	S	R	E	V	I	E	N	I	E	R	G	F	R	M	P	K	P	T	N	H	Y	F	P	D	N	I	Y	Q	L	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																															.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																															.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	H	M	A	P	E	V	V	L	G	R	S	C	D	A	K	V	D	V	W	S	S	C	C	M	M	L	H	M	L	N	.	G	C	H	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	R	E	I	P	P	S	C	A	P	L	T	A	Q	A	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.								T	T					T																	.	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G			T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																															.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.		.	.	.	.	.																		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	C	W	D	A	V	P	E	K	R	P	T	F	E	F	L	N	H	Y	F	E	S	F	S	V	T	S	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	G	L	R	K	E	P	I	H	R	V	S	A	A	E	L	G	G	K	V	N	R	A	L	Q	Q	V	G	G
Template Known Secondary structure					T		S	S	T	T	T	S																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		631	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions