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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank232Aligned Residues251
% Identity22%Templatec4fr4B_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 32a; PDBTitle: crystal structure of human serine/threonine-protein kinase 32a (yank1)
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   278.280.........290.........300...... ...310..... ....320.........330.........340.........350..
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Query Sequence  EIPRSEIQLLRKLGRGNFGEVFYGKWRNS. IDVAVKTLR. . . . EGTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPI
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Template Sequence  DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM
Template Known Secondary structure 


GGG

SS

TTT

TT
T


TTB


SS
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   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   353......360.........370.........380.........390.........400.........410.........420.........430..
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Query Sequence  YIVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARVIADD
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Template Sequence  FMVVDLLLGGDLRYHLQQN. . VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE
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TTTT..



TT



SGGG
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TT


TT
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   97..100.........110..... ....120.........130.........140.........150.........160.........170....
 
   433......440.........450.... .....460.........470.........480.........490.........500.........
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Query Sequence  EYCPKQGSRFPVKWTAPEAIIY. . . GKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFPD
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Template Sequence  TQITTMAGT. . KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR. GRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQ
Template Known Secondary structure 

B



S
..GGG

GGGT


SS

B
T.SS
SS


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   175....180... ......190.........200.........210........ .220.........230.........240.........250.
 
   510.........520........ .530...
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Query Sequence  NIYQLLLQCWDAVPEKRPT. FEFLN
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Template Sequence  EMVSLLKKLLEPNPDQRFSQLSDVQ
Template Known Secondary structure  S
SSTTTS

S
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   252.......260.........270......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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