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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank292Aligned Residues249
% Identity22%Templatec3utoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:twitchin; PDBTitle: twitchin kinase region from c.elegans (fn31-nl-kin-crd-ig26)
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   282.......290.........300...... ...310........ .320.........330.........340.........350.........
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Query Sequence  SEIQLLRKLGRGNFGEVFYGKWRNS. IDVAVKTLREGT. MSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQEYM
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Template Sequence  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM
Template Known Secondary structure  GTTTTTT



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   154.....160.........170.........180.........190.........200.........210.........220.........230...
 
   360.........370.........380.........390.........400.........410..... ....420.........430.......
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Query Sequence  SKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGEN. . NVAKICDFGLARVIADDEYCPK
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Template Sequence  SGGELFEKVAD. EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK.
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   234.....240.... .....250.........260.........270.........280.........290.........300.........310.
 
   438.440.........450.........460.........470.........480.........490..... ....500.........510......
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Query Sequence  QGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIER. GFRMPKPTNHYFPDNIYQLLL
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Template Sequence  . VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS. GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR
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   312.......320.........330.........340........ .350.........360.........370.........380.........
 
   517..520.........530....
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Query Sequence  QCWDAVPEKRPTFEFLNH
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Template Sequence  KLLLADPNTRMTIHQALE
Template Known Secondary structure  TTS
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   390.........400.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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