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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank251Aligned Residues236
% Identity25%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   282.......290.........300...... ...310..... ....320.........330.... .....340.........350.....
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Query Sequence  SEIQLLRKLGRGNFGEVFYGKWRNS. IDVAVKTLR. . . . EGTMSTAAFLQEAAIMKKF. RHNRLVALYAVCSQEEPIYIV
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV
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   353......360.........370.........380.........390.........400.........410.........420.........430..
 
   356...360.........370.........380.........390.........400.........410.........420.........430.....
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Query Sequence  QEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARVIADDEYC
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Template Sequence  MEFVNGGDLMFHIQKS. . RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMC. . . . . . . . .
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   433......440........ .450.........460.........470.........480.........490.........500.
 
   436...440.........450.........460.........470.........480.........490.........500.........510.....
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Query Sequence  PKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFPDNIYQLL
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Template Sequence  . KEGICGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILND. EVVYPTW. . LHEDATGIL
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   502.......510.........520.........530.........540 .........550.........560 ....... ..570......
 
   516...520........ .530...
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Query Sequence  LQCWDAVPEKRPT. . . . . . FEFLN
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Template Sequence  KSFMTKNPTMRLGSLTQGGEHAIL
Template Known Secondary structure  T
SSGGGSTTSGGGT
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   586...590.........600.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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