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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank87Aligned Residues240
% Identity24%Templatec3p23B_
PDB info PDB header:hydrolase, transferaseChain: B: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the human kinase and rnase domains in complex2 with adp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   279280.........290....... ..300.........310.........320.........330.... .....340.........350......
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Query Sequence  IPRSEIQLLRKLGRGNFGE. VFYGKWRNSIDVAVKTLREGTMSTAAFLQEAAIMKKF. RHNRLVALYAVCSQEEPIYIVQ
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Template Sequence  VGKISFCPKDVLGHGAEGTIVYRGMFDNR. DVAVKRILPECFSF. . ADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI
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   566...570.........580.........590.... .....600........ .610.........620.........630.........640..
 
   357..360.........370.........380.........390.........400.........410....... ..420.........430.
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Query Sequence  EYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNV. . . . . AKICDFGLARVIAD
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Template Sequence  ELCA. ATLQEYVEQKDFA. HLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAP
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S.SSS
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   643... ...650......... 660.........670.........680.........690.........700.........710.........720
 
   432.......440.........450.........460.........470.........480.........490.........500.........510.
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Query Sequence  DEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFPDNI
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Template Sequence  . . . . . . . . . . GTEGWIAPEMLSEENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIA
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   733......740.........750.........760.........770.........780.........790.........800..
 
   512.......520.........530...
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Query Sequence  YQLLLQCWDAVPEKRPTFEFLN
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Template Sequence  RELIEKMIAMDPQKRPSAKHVL
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SSGGG


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   806...810.........820.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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