Job Description P00528 Confidence 99.63% Date Tue Jan 22 11:25:29 GMT 2013 Rank 468 Aligned Residues 81 % Identity 23% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.							.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		S	E	D	W	F	F	E	N	V	L	R	K	E	A	D	K	L	L	L	A	E	E	N	P	R	G	T	F	L	V	R	P	S	E	H	N	P	N	G	Y	S	L	S	V	K	D	W	E	D	G	R	G	Y	H	V	K	H	Y	R	I	K	P	L	D	N	.	.	.	.	.	.	G	G	Y	Y	I	A	T	N	Q
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence								.													.	.																													.	.	.	.													.	.	.	.	.	.
Template Conservation								.													.	.																													.	.	.	.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	.	.	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	.	.	.	.	L	F	Q	H	V	D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G	Q
Template Known Secondary structure				T	T			.												T	.	.	T	S		T	T								S	S		T	T										T	T	.	.	.	.											S		S	S	T	T	S			S					T	T
Template Predicted Secondary structure								.													.	.																													.	.	.	.
Template SS confidence
		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	P	S	L	Q	A	L	V	M	A	Y	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	H	D	L	D	Q	I	I	V	E	Y	L	Q
Template Known Secondary structure				S	S								T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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