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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank62Aligned Residues242
% Identity27%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   282.......290.........300...... ...310.........320.........330.........340.........350.........360
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Query Sequence  SEIQLLRKLGRGNFGEVFYGKWRNS. IDVAVKTLREGTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQEYMS
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK
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   60.........70.. .......80.........90..... ....100.........110.........120.........130....
 
   361........370.........380.........390.........400.........410.. .......420.........430.......
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Query Sequence  KGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLI. . . GENNVAKICDFGLARVIADDEYCPK
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Template Sequence  GGELFDEIIHR. . MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ. . KKM
Template Known Secondary structure  S
B..SS

TT
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TT

BTT..B
B
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   143......150... ......160.........170.........180.........190.........200.........210..... ...
 
   438.440.........450.........460.........470.........480.........490....... ..500.........510......
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Query Sequence  QGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGF. RMPKPTNHYFPDNIYQLLL
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Template Sequence  KERLGTAYYIAPEVLR. KKYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK
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S
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   219220.........230.... .....240.........250..... ....260.........270.........280.........290......
 
   517..520.........530....
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Query Sequence  QCWDAVPEKRPTFEFLNH
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Template Sequence  QMLQFDSQRRISAQQALE
Template Known Secondary structure  T
SSTTTS

T
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   297..300.........310....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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