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Job DescriptionP00528
Confidence100.00%DateTue Jan 22 11:25:29 GMT 2013
Rank166Aligned Residues247
% Identity28%Templatec3dxnA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-like domain protein kinase isoform 3; PDBTitle: crystal structure of the calcium-dependent kinase from toxoplasma2 gondii, 541.m00134, kinase domain.
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   285....290.........300.........310...... ...320.........330.........340.........350.........360
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Query Sequence  QLLRKLGRGNFGEVFYGKWRNSIDVAVKTLRE. . . . GTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQEYMS
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Template Sequence  RYQRVKKLGSYGEVLLCKDKTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYR
Template Known Secondary structure  T





GGGS


S
TT


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SS


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   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   361........370.........380.........390.........400.........410.........420.........430.........440
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Query Sequence  KGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARVIADDEYCPKQGS
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Template Sequence  GGELFDEIILRQ. . KFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSDALIKIVDFGL. . . . . . . SAHFER
Template Known Secondary structure  S
BS..S

TTT


S


GGGSS





STT
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T
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   105....110...... ...120.........130.........140.........150.........160......... 170.....
 
   441........450.........460.........470.........480.........490....... ..500.........510.........
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Query Sequence  RFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGF. RMPKPTNHYFPDNIYQLLLQCW
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Template Sequence  LGTAYYIAPEVLR. KKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLML
Template Known Secondary structure  TT
TTT

T.T


T.SS
SS

SS





TTTTTTS
T
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   184.....190...... ...200.........210....... ..220.........230.........240.........250.........260.
 
   520.........530... ......540..
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Query Sequence  DAVPEKRPTFEFLN. . HYFESFSVT
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Template Sequence  TYEPSKRISAEEALNHPWIVKFCSQ
Template Known Secondary structure 
S
TTTS

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   262.......270.........280......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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